Tripterygium wilfordii (thunder duke vine): 120004932
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Entry
120004932 CDS
T07256
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120004932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
120004932
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120004932
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
120004932
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Fn3_assoc
XRN_N
Motif
Other DBs
NCBI-GeneID:
120004932
NCBI-ProteinID:
XP_038710215
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All DBs
Position
9:10330947..10332688
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AA seq
329 aa
AA seq
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MGRAKYWSKSAPSSCQNRKRARIFENQREDQEQEQESCFYEEEDDEEEEEEESSESEREC
EDGEEPESSKGSMIVFITEPNVLDCDIYYEPLTTPVFQEWHIACSKCCQRLKNKCPSCRL
RISSIRCRAIEKILESIRVSCQNTAYGCNETSMLYKLKHHHEKTCVYAPCSCPFANCDYQ
SSLKQLPLHFDERHPNDLSYSFKYDSPFSINLDENVQCIVLEEDKEGDLFAITKDTSQFF
GNAVVISHIIGTAVQRRHPYELDASINEPEGTSTLKIQSFTRNYVPCKSSKGKTPPSAGT
SVVIPKDSLYGGCSYLRQVRLSVCIHPSI
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagcaaaatattggtcaaaatcagctccttctagctgccaaaacagaaagcgg
gcaagaatctttgaaaaccaaagagaagaccaagaacaagaacaagaatcatgcttttac
gaagaagaagatgatgaagaagaagaagaagaagaatcaagcgaaagcgaaagagaatgc
gaagatggtgaagaacctgaatcgtccaaaggttccatgattgttttcataaccgaacct
aatgtgcttgattgtgatatctactatgagcccttgactactcctgtctttcaggaatgg
catatagcttgctccaagtgctgccagcgacttaaaaacaaatgtccctcatgcagattg
cgtatcagctctatccgttgccgggcaatcgaaaaaattcttgagtcgatcagagtatca
tgtcaaaacactgcctatggatgcaatgaaacatcaatgttgtataaactgaaacaccac
cacgagaagacttgtgtctacgctccatgttcatgtccctttgccaactgcgactaccag
agttcgctgaagcagttgcctctccacttcgacgagaggcatccaaatgacttgagttat
tcgttcaagtacgactcaccattctcaatcaatttagatgagaatgtccaatgcattgtc
cttgaagaagataaagaaggtgatctatttgccatcacaaaggacacgagtcaattcttt
gggaatgcagttgttattagtcatattattgggacagcggtgcaaagacgacatccctat
gaactcgacgcaagtataaatgaacctgaaggaaccagcactctcaaaattcagtctttc
acaagaaattatgtgccatgtaagagcagcaagggtaaaactcctccttctgcagggaca
tccgttgtgattccaaaagattccttgtatggaggttgttcgtacttgcggcaggtcaga
ctgtctgtatgcatacatccctctatctga
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