Tripterygium wilfordii (thunder duke vine): 120005148
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Entry
120005148 CDS
T07256
Name
(RefSeq) RNA polymerase sigma factor sigC isoform X1
KO
K03093
RNA polymerase sigma-I factor
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
120005148
Transcription machinery [BR:
twl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
120005148
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Motif
Other DBs
NCBI-GeneID:
120005148
NCBI-ProteinID:
XP_038710552
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Position
9:13696369..13700725
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AA seq
534 aa
AA seq
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MGLGFRLNLKWGFPIQSHSLNNPPSRLSLSLVRGWETSSNPARLSFVSVISEESEVTHKD
SLRAYASTTQQTLDREDNEMEEMKDSTPSTSSREEKGPRFNLLLDNLEILEKTVADSDAL
RLEKDILLQLGRLGALKLFDTCLSRTLETSNIFDLSDVHTEPIIEYNTNSINRNDNGEHT
VSSGKKGQRKLRRKRALVNATKGYSRSLPSETIQKDIQWSSTSSLRRTSKSKTRRSMIAR
NEAELSKGVKLVAELERIRMRLEEQTGRVSSLSCWAEAAGVDEKVLQQDLRFGWYCRDEL
FRSTRGLILYLARHYRGKGIAVEDLLQAGYLGVLQGAERFDHKRGCKFSTYVQYWVRKYM
SRMVAQYSRGIQIPYALNGKINQIQLARKFLKNSHGRHADDIEIAKHTGLSLANIRAATQ
CLRVVGSVDHKKGDFHGSKYTEIVPDRSMKSPGEIVMAEHMKKDVHVLLKCLDSRERQVL
VLRFGLNDNQPKSLGEIGKIFHVSREWIRQIEKKAMEKLRDEETCKNMSYYLDL
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgggattgggttttaggctaaatctcaagtggggttttcctattcaatcccactccctc
aacaatccaccttccaggctctctctgtctcttgtgagaggctgggagacttcttccaac
ccggcgaggttgtcttttgtgtccgtaatttctgaggagagtgaagttacccacaaagat
tcgttgagagcatatgcatcaactactcaacaaaccttggacagagaggataatgaaatg
gaggaaatgaaggatagtactccatccacaagctcaagggaggaaaagggtccacgtttt
aatttgttactggacaaccttgaaattttggagaagacagttgctgattcagatgcgctt
aggttggaaaaggatatacttttacagctaggaaggctcggtgctctgaaattatttgat
acgtgtctatctagaaccctagaaacttctaatatttttgacttgtctgatgttcacact
gaacctatcattgagtacaacacgaacagcataaatcgtaatgacaatggtgaacatacg
gttagttctggaaaaaagggacaaagaaaattgagaaggaaaagggcattggtgaatgct
actaaaggttatagtcggtcattgccctcagaaaccatccaaaaggatattcaatggtct
agtacttcctccctgagaagaacatcaaagtccaagactagaagatcgatgatcgcaagg
aacgaagctgaactgtccaagggagttaagttggttgcggaattggagagaatcagaatg
aggttggaggaacagactggaagagtatccagcttaagttgctgggcagaggcagctgga
gtggatgagaaagtgctgcagcaggatctgcgttttggttggtattgtagggatgagctt
tttaggagtactcggggtttaattctatacctggcaaggcactacaggggcaagggaata
gctgtggaagatctgcttcaggcaggatatttgggtgttctacaaggtgctgaaaggttt
gatcacaaaagggggtgcaaattctcaacctatgttcaatattgggtaagaaaatacatg
tcaaggatggtggcacagtattccagagggatccaaattccttatgctttaaacggcaaa
ataaatcagatacagttagctcggaaattcctcaaaaacagccatgggagacacgcagac
gatattgaaattgcaaagcacaccggtctttctttggctaacattagagctgctacccag
tgcctgagggttgttggttcagttgatcataagaaaggagattttcatggttcaaaatac
acggaaatagtacctgatagatcaatgaagagtccaggagaaattgtcatggcggaacac
atgaagaaagatgttcatgtcctgttgaagtgtttggattcaagagaaagacaagtgttg
gttttaagatttggtcttaatgacaaccaaccaaagtcactcggagagattgggaagatt
ttccatgtaagcagagagtggataaggcaaatagagaagaaagcaatggaaaaattacgg
gatgaagaaacctgtaaaaacatgagctattatttggatttatag
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