Tripterygium wilfordii (thunder duke vine): 120005317
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Entry
120005317 CDS
T07256
Name
(RefSeq) probable pectate lyase 16 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120005317
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120005317
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120005317
NCBI-ProteinID:
XP_038710823
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Position
9:1182159..1188907
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AA seq
394 aa
AA seq
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MAALSPILFLSCLLSIVPLTLQADSLENDYNGVNALPSSVPNYPKLLNVLDSCWRDKSNW
ATNRRALADCAVGYGSGSMGGKYGAIYIVTDSSDDPVNPKPGMLRYGVIQTRPLWIIFAE
DMVITLKNELMVNSFKTIDGRGANVEIAYGPCITIQGVSHVIVHGISIHDCKPGKSGMVR
NTPMHVGKRMGADGDGISVFASSNIWIDHCYLARCADGLIDVIHASTAITISNNYFTQHD
KVMLLGHNDGFSADKVMKITIVLNRFGTGLIERMPRVRFGYAHVANNRYDEWQMYAIGGS
ANPTIFSEGNYFIAPNNANSKEVTKREVSKNWNNWKWRSSRDVFLNGAYFVQSGYGSCAP
HYASLQSFKVAPGFFVPALTSDAGPLSCVVGKAC
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggccgcattatctcctatattgtttctctcatgtcttctatcaattgtccctttaacc
ttgcaagctgattcactagagaacgactacaatggcgttaatgccttaccaagttctgtc
cctaactacccaaaactcttgaacgtacttgactcctgctggcgagacaagtctaattgg
gcgactaatcgtcgcgcactggcagattgtgcggtggggtatggtagtggttcaatggga
ggtaaatatggtgccatttatatagtcactgattcgtctgatgaccccgtgaaccccaaa
ccgggcatgcttaggtacggtgtgatccaaacaaggccgttatggataatttttgctgaa
gatatggtgattacgctaaaaaatgagttaatggtgaatagtttcaagacaattgatggg
agaggggctaatgttgagattgcgtacggtccatgtataacgatacaaggggttagtcat
gtgattgttcatggtataagtattcatgattgtaagcctgggaagagtggcatggttagg
aatactcctatgcatgttgggaagcgaatgggggctgacggggatggcattagcgtgttt
gcatcgtcgaatatctggatcgatcattgttatctagctcggtgtgctgatggacttatc
gatgtgattcatgcttcaactgctatcaccatttcaaacaactacttcacacaacatgat
aaagtgatgctgcttggacacaatgatggattcagcgctgacaaggttatgaagattacg
attgtacttaatcgtttcgggactggcctaattgagaggatgccaagggtgaggtttgga
tatgctcatgttgccaacaacagatatgatgagtggcaaatgtatgcaattggtggtagt
gcaaaccccaccatattcagtgaaggaaactacttcattgctcctaataatgctaattcc
aaagaggttaccaaaagagaggtcagcaaaaactggaacaactggaaatggaggtcatct
agagatgtattcctgaatggtgcttattttgttcaatctggatatggaagttgtgctccg
cattacgctagtttgcaatcattcaaagtagctccaggattctttgttcctgccttaaca
tctgatgcaggccctctaagttgtgttgttggtaaagcatgttga
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