KEGG   Tripterygium wilfordii (thunder duke vine): 120005339
Entry
120005339         CDS       T07256                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Pathway
twl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:twl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120005339
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:twl03021]
    120005339
Enzymes [BR:twl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     120005339
Transcription machinery [BR:twl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     120005339
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 120005339
NCBI-ProteinID: XP_038710854
LinkDB
Position
9:11421456..11431386
AA seq 1198 aa
MAESSVAKEFMDMNSGGEKLSNGSKMMDLDDYDDDDDDIGYSILSDLGEQTLTAFCRKAA
ASFFDEYGLISHQINSYNDFINNSLQSVFDSFGDIIVQPGYDPSKKGENEWRHASVSFGK
VTLDRPSFWAGTEGNELKMLPRHARLQNMTYSSKMKVEVRVQVYTEKLVRSDKFKTGKEQ
YLERHVLSDDTTNIIIGRIPVMVNSELCWMKDAEKADCDFDHGGYFLIKGAEKVFIAQEQ
SCLTRLWISNIQGWTVAYRSEFKRNRLIVRIVEIPEIENIKGGKKVLNVYFLSTEIPLWI
LFFALGVSSDREVVDLIDFKSEDANVVNLLFASIYDADKNCDDFRREKKALNHVEKLIKG
TQFPPVESIEECINMYLFPNLRGLRQKACFLGYVVKCLLQARTGLRKCDNRDSFRNKRLD
LSCELLKRELKLHIGHAQKRMVKALQRDLYGDRMVRPIEHYLDASIITNGLSRAFSTGAW
SHPFKRMERISGVVANVGRANPLQTMVGSRKTRQQVLYTGKVGDARYPHPSHWGKVCFLS
TPDGENCGLVKNMSMTGLVSTSILEPLVEKLFESGMDKLVEDDFASLHGKDKVFLNGDWV
GVCKDSHSFVAELRSKRRRKELPHQIEIKRDEQQQEVRIFSDAGRILRPLLVVENLNKIK
SFKGENYTFQNLMDRGIVELVGPEEEEDCLTAWSIKHLLMEVEKQTIKYTHCELDMSFLL
GLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTNPNIRVDALSHQLHYPQRPLFRTVA
SDCLGKPGYPLGHNGIMPKPEYFNGQNAIVAVNVHLGYNQEDSLVMNRASLQRGMFRSEH
IRSYKADVDNKELSEKRKNIEDSVNFGKIESKIGRVDSLDDDGFPSIGANLQSGDIIIGR
FAESGADHSIKLKHTERGMVQKVVLSSNDDGKNFAVVSLRQVRSPTLGDKFSSMHGQKGV
LGFLDHQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSMRYATPFSA
LSVDAISEQLHRAGFSRWGKERVYSGRTGEMIRSLIFMGPTFYQRLVHMAEDKVKFRNTG
PVHPLTRQPVADRKRFGGVKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQNCKSV
ANVIQRAVSSGRKIRGPYCRICESADDIVKANVPYGAKLLCQELFSMGIGLKFDTELC
NT seq 3597 nt   +upstreamnt  +downstreamnt
atggctgaatcatcagttgccaaagaattcatggatatgaatagtgggggagagaaatta
tctaacggatcgaaaatgatggatctagatgattatgacgacgacgatgatgatattggc
tattccatcctaagtgatttgggagaacagactttgacggcattctgtagaaaggcagca
gcgtcattttttgatgagtacggtctgatcagtcatcagatcaactcctacaatgacttc
atcaacaatagtcttcagagtgtctttgattcctttggcgatatcatagtccagcctgga
tatgacccatcaaagaaaggggagaacgaatggaggcatgcttctgtgagctttggaaag
gtcacccttgatcggccaagcttctgggccggaacagaagggaatgagctaaaaatgctt
cccagacacgcaagactacagaatatgacctattcatcgaagatgaaagtggaagttcgt
gtgcaggtatatacagaaaagctcgttagaagtgataaatttaaaactggaaaggagcaa
tatcttgaaaggcatgttctcagtgatgacaccacaaatattataattgggaggattcct
gtgatggtgaattctgaactttgttggatgaaagatgccgagaaagctgattgtgatttt
gatcatggaggctatttcttgatcaagggtgctgagaaggtatttatagcacaagagcaa
agttgtttaacacgactttggatctcaaacattcagggctggacagtggcatataggtca
gagttcaagagaaacagattgattgttcgaatagtagaaattcccgaaattgaaaatatt
aaaggaggaaagaaagtcctcaatgtatattttttgtcgacggagatccctttatggata
ctgttttttgctctgggggtctcatcagaccgagaagttgtcgatttgatcgactttaaa
agtgaagatgccaacgtagtgaatttactctttgcgtctatatatgatgctgataagaac
tgtgatgacttccgtagagagaagaaagctcttaaccatgttgagaagctgataaaaggt
acccaatttccacccgtggagagtattgaggagtgtattaatatgtatctatttccaaac
ctccgtggcttaagacagaaggcttgctttcttggatatgtggttaagtgtctattacag
gcccgtactggcttaagaaaatgtgataacagagatagttttagaaacaagaggttggat
ttatcttgtgagttgctcaaaagggagctgaaattgcatattggacatgcacagaaacgc
atggtaaaggctttgcagagagacctttatggagatcgtatggtacgacctattgaacac
tatctggatgcatccatcatcaccaatggtctctcgagagcattctcaactggagcatgg
tcacatccctttaagaggatggaaagaatttctggtgttgtggcaaatgttggtcgtgca
aatccattgcaaacaatggttggttcaaggaaaacgcgacagcaggttctgtacacagga
aaggttggggatgccagatatccacacccatctcattggggtaaagtttgttttctctca
accccagatggtgaaaattgtgggcttgtgaaaaatatgtccatgacaggacttgttagc
acaagcatattggagcctctagttgagaaactatttgaatctggaatggataaactggta
gaggatgattttgcttcgctgcatggaaaggataaagtttttctaaatggggattgggtt
ggagtttgtaaagactcccattcgtttgttgctgagctaagaagtaagaggcgcaggaag
gagctgccacatcagattgaaattaaaagagatgaacagcagcaagaagtacgcatattc
tctgatgctggaaggatcctacgtcctcttttggttgtcgagaatttgaacaagataaaa
tcctttaaaggtgaaaactacacgttccagaatcttatggacagggggatagtggagctt
gttgggcctgaagaggaagaggattgtcttactgcatggagcattaagcacctgttgatg
gaagttgagaagcaaacgatcaagtatacccactgtgaacttgatatgtcatttctatta
ggtttgagttgtgggattattccatttgcaaatcatgatcatgcgaggagggtgctttac
caagctcagaagcattctcaacaggctattggattttcgacaacgaatcctaacattagg
gtggatgctttgtctcaccaattacactatccccaaaggcccctttttcgaactgtggcc
tctgattgtcttggaaagccaggatatccacttggtcataatggaataatgccaaagcca
gagtacttcaatggccagaatgcaattgttgcagtgaatgttcacttgggatacaaccag
gaggattctctggtaatgaatcgagcatcattacagcgtggtatgttccgatctgagcac
atcagaagttacaaggccgatgttgacaataaggaactatcagaaaagaggaaaaatatt
gaggattctgtgaattttggaaagatagaaagtaaaattggacgtgttgatagcctggat
gatgatggatttccttccattggtgctaacctgcaaagtggtgatattataattggcagg
tttgcagaatctggtgctgatcatagtatcaaacttaagcacacagagaggggtatggtt
cagaaagtagtattatcttctaatgatgatggaaagaattttgctgtagtatctttgaga
caggttcgttccccaactcttggagacaagttttcaagtatgcatggtcagaaaggtgtg
ctaggatttttagatcatcaagagaactttcctttcaccatacaagggatagttccagat
attgtgataaatccacatgcatttccttcacggcaaactcctggtcaactattagaggct
gctctagggaaagggatagcttgtggagggtcaatgagatatgccactcccttctccgcc
ctttctgttgatgccatctcagaacagcttcacagggctggattttcaagatggggaaaa
gaaagagtttatagtggccgaactggggaaatgattcgttcactcatatttatgggcccc
acattctaccagcgtttggtccacatggctgaagacaaagtgaaattccgcaacacaggt
ccagttcacccgctgactcgacagccagttgccgatcgtaagcgttttggtggggtcaag
ttcggtgagatggagcgggactgcctcatagcccatggtgcgtcagccaacttacacgag
cgcttatttaccctcagcgactcttcccaaatgcacatttgccagaactgtaagagtgtt
gcgaatgtgattcagcgagctgtgagtagcggacggaaaatcagaggtccttactgccgt
atctgtgagtcagctgatgatattgttaaggctaatgtaccatatggcgcgaagttgttg
tgccaggagctttttagcatgggcattggactgaagtttgacaccgagctctgctga

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