Tripterygium wilfordii (thunder duke vine): 120005396
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Entry
120005396 CDS
T07256
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Module
twl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120005396
Enzymes [BR:
twl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
120005396
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Gene cluster
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
120005396
NCBI-ProteinID:
XP_038710944
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Position
9:complement(156601..159117)
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AA seq
483 aa
AA seq
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MKDLDLNRERESFTSLPKFRSILGWYPVRNEAVASAALTNTLYCPTFQFPKDILQFIKRD
GKTQNTKNAIAIAIAIAIAMDKFVFLRIFVLVSTTIFSFAKPNRSQFNVLDYGALPGTTE
DSSHAFLRAWNDFCNTTTEDPVLTVPPGKTFLLNPVVFNGPCKPKHLTLRILGVIAAPSS
PKTWSRFDPGRWLTFRGVTGLSIAGCGGFDGRGEGWWDQSCRDHQGLKGCTSLAPTALSF
QLCNNITLSNVHFINSPQVHVLIYGSSGIDIDSILIDSPGNSPNTDGIHIQAAQNISITN
SIIGSGDDCVSIGDYTSNIRISDVECGPGHGISIGSLGKDGNVVQVENIHVTNVSFTNTT
NGARIKTWQAGRGYVRDISYKNCKFDSVNYPIIIDQNYCLKGDACKEMKTGVHISNVTFD
NFSGTSTTDVAISLNCSWAVGCTGIILQSIKLTSAMTGKRVTSSCTNAHGNAIGMVEPPS
CLS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatttggatctcaatagagagagggagagtttcacttcacttccgaagtttaga
agcatactgggatggtatccagtgaggaatgaagcggtggcatctgctgctttgactaac
actctttattgtcctacttttcagtttcctaaagacattcttcagttcatcaaacgcgat
ggtaagacccaaaacacaaaaaacgccatcgccatcgccatcgccatcgccatcgccatg
gataagtttgtttttctacgtatttttgtattggtttctacaacaatcttctcatttgcc
aaaccaaatcgaagccagttcaatgtcctggactatggagctcttcctggcaccactgaa
gatagttcacatgcattcctaagggcatggaatgatttctgtaataccaccaccgaagat
cctgtattgactgttccacctggcaagaccttcttgttaaatccagttgtctttaacggt
ccatgcaagcctaagcacctcacacttcgaatactaggagtaattgcagcaccgagctca
ccaaaaacatggagcaggtttgatccagggagatggctgacatttagaggggtgaccggc
cttagcatagccggttgtggtggatttgatggccggggagagggttggtgggatcaatca
tgtagagatcaccaaggcctgaaaggctgcacttcattggcaccaactgcattgagtttc
caactatgcaataacattactctcagtaatgttcacttcatcaacagcccacaagtgcat
gtcctaatatacggctcatccggaattgacattgacagtatcttgatcgactctcctgga
aacagccctaacactgatggcatccacatccaagcagctcaaaacatttccatcacaaac
tccattataggctccggtgatgactgtgtttcaattggtgactacacttccaacattagg
atctcagacgtagaatgcggacctggccatggaataagtattggaagcttggggaaggat
ggcaatgtagtgcaggtagagaacattcatgtgacaaatgtaagtttcaccaacactacc
aatggagctaggataaaaacttggcaggctgggaggggctacgttcgagacatctcatat
aagaactgcaaattcgactcagtgaattacccgataataattgatcaaaattactgtctc
aaaggggatgcttgcaaggaaatgaaaactggagtgcatataagcaatgttacctttgat
aatttctctggaacatcgacaacggatgtggcaatcagtctcaattgcagctgggctgta
ggttgcactggaatcattttacagtccataaagctgacatctgccatgactggaaagaga
gtcacttcctcttgcacaaatgcccacgggaatgctattggaatggttgagccaccatcc
tgtcttagttga
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