Tripterygium wilfordii (thunder duke vine): 120005440
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Entry
120005440 CDS
T07256
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Module
twl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120005440
Enzymes [BR:
twl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
120005440
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120005440
NCBI-ProteinID:
XP_038710991
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Position
9:883256..885197
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AA seq
352 aa
AA seq
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MPYIYGVKKENKCQSKPSSAKEVNIESIFSSLNAMDNLAFILFLGLVSVFGKANAHTFNV
LDFGATPGTIEDNSQAFLRAWNALCNLTTENHILTVPFGKAFLLNPVVFNGPCNAKKLTF
QILGEIVAPSSPTTWNGLDAGKWLTFRDVNGLTITGSGGFDGRGKGCELQTLSFLSSNDI
TLSNVHFINSPQAHILLFGSSGIGIDNIFINSPGDSPNTDGIHIQSAHNISITNSIIAAG
DDCVSIGDYTSNIAISDVKCGPGHGISIGSLGRDGNEVQVENIHVKNVSFFNTTNGARIK
TWQVGRGHVRDISFENCKFDSVEYPIIIDQNYCSPRDACKEMVHKIHLFPSI
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgccttatatatatggagtaaagaaggaaaacaaatgccaatcaaaaccatcttctgcc
aaagaagttaacattgagagtatcttcagctcattgaatgccatggacaatcttgctttc
atactctttctgggattagtttcagtatttggcaaagcaaatgcacacactttcaatgtc
ttggattttggagctactcctggcaccattgaagacaattcacaagcatttctcagggca
tggaatgctttgtgtaatctaacaacggaaaatcatatattgactgttccatttggaaag
gcattcctgttaaatccagtggtgtttaatggcccatgcaacgctaagaaactcacattt
cagatactaggggaaatcgtagctccaagctcaccaacaacatggaatggacttgatgcc
ggtaagtggcttacgtttagggatgtgaacgggctgacgatcactggctccggcggtttt
gatggccggggaaagggttgtgaattacagacattgagtttcctatcaagcaacgacatt
acgctcagtaatgttcacttcatcaacagcccacaagcgcatatcctactatttgggtca
tccggtattggcatcgacaatatcttcatcaactctccaggagacagccctaacactgat
ggcatccacatccaatcagctcacaacatttctatcacaaactccataatcgccgcaggt
gatgactgtgtttcaattggtgattacacttctaacattgcgatatcagatgtaaaatgc
ggacctggtcatggaataagcatcggaagcttggggagggatggcaacgaggtgcaggta
gagaacattcatgtgaagaatgtaagcttctttaacactaccaatggagctagaataaag
acatggcaggttgggaggggccacgttcgagacatctcattcgagaattgcaaattcgat
tctgtagagtaccccataatcattgatcaaaactattgttctcctagggacgcttgcaag
gaaatggtacacaaaatacacctttttccctcaatttga
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