KEGG   Tripterygium wilfordii (thunder duke vine): 120005498
Entry
120005498         CDS       T07256                                 
Name
(RefSeq) lysine-specific demethylase JMJ18-like
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:twl00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:twl01009]
    120005498
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:twl03036]
    120005498
Enzymes [BR:twl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     120005498
Protein phosphatases and associated proteins [BR:twl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120005498
Chromosome and associated proteins [BR:twl03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120005498
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 120005498
NCBI-ProteinID: XP_038711072
LinkDB
Position
9:complement(2985795..2993764)
AA seq 1064 aa
MEQFKLAAESHIKEEPSSKHNMIGDNSFECPGSPRNQEIMARWDPSGACRPIIDEAPVFY
PSVEEFKDALGYISKIRTQAESFGICRIVPPSYWTPPCPLKEEDTWRHAKFSTRTQQVDL
LQNREPMKKKCRGRKRKRRRNSRMGSIRRHANYGSKENVACESDEKFGFHSGSDFTLEEF
QKYASYLKECYFGMKDTKEDPVSRGIDQKKWEPSVEDIEGEYWRIIERPTDEVEVYYGAD
LETGKFGSGFPKASSMVTGSDSDPYVVSGWNLNKLPRQPGSVLCFEESDISGVLVPWLYV
GMCFSSFCWHVEDHHLYSLNYHHWGDPKIWYGVPGSHASSLEDAMKKHLPYLFEEQPHLL
HELVTQLSPSVLKAEGVPVYRAVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLA
HGQHAVELYSEQRRKTSISHDKLLLGSAQEAVKALWELSVLGRETTVSLGWKSVCGKDGM
LTRAVKRRVQMEEERVKCLPAHVKFLKMEKDFDLESERECFWCYYDLHLSATSCRCSADQ
FACLKHANLLCSCDVKHRYVLLRYTVDELNTLVEALEGSLDALKVWASENPGMISVNEKG
VPADKLDAKRESFRHEKQSLSCSPVVQDVMETSAPICSSSNVLSEEVQSALQTSSASHVT
IDSHVSTSNNDLVKGEEVKAGKLGCPDLNLDVDSADHESGVLHVSESCDNKAISKEIPMS
VCKQKKICSSNSTKQIDIIVLDCDLNSSESHERNRNLSSFSGVVRHGCSNGGKKLFGVDL
LVPIENSVASSNKLLRSDVVNISDVKVADQSYLVGRLDFSVVPLNFGSVMSGKPWCNSQA
IFPKGFKSRIKYFSVHNPAKVCSYISEVLDAGFLGPLFKVTLEEHPNESFTAASAEKCWE
MVLQQVNKEIVRRKNSWERDLPPLQAVQSINGLEMFGFLSPPIIAAIEALDPGHLSSRYW
QDRIATSSGSSAVNHHLSDRLFSAVQKDAKLFGFHLTKAGPNNPALKDEHLVGENKRLAL
QQLFRKANPEELKIMHKIFCSEARSAEWRAAYRTLTEEMEKRRR
NT seq 3195 nt   +upstreamnt  +downstreamnt
atggaacagttcaaattggctgcagaatctcatattaaggaggagccttcatcaaaacac
aatatgataggcgacaattcttttgagtgcccgggaagtcctcgaaatcaagagataatg
gctagatgggatccatctggagcttgcaggcccatcattgatgaagctcctgtgttttat
ccgtcggttgaggagtttaaagatgcacttggttacatatcaaagatacgtacacaagca
gaatcatttggtatatgtcggattgtccctccatcttactggactccaccttgccctctt
aaggaggaagatacctggagacatgctaaattttctactagaactcagcaggttgatttg
cttcaaaacagggagcccatgaaaaagaagtgtagaggccggaagcgaaaacggaggagg
aactcaagaatgggaagcataagaagacatgccaactatggtagtaaagaaaatgttgcc
tgtgaatctgatgagaagtttggattccattcaggatcagacttcacacttgaagaattt
cagaaatatgccagttatttaaaagagtgttactttggaatgaaggacactaaggaagat
ccagtgtctcgtggaatagatcaaaagaaatgggaaccctctgtggaggatattgaaggt
gaatactggcggattattgaacgaccaacagatgaggttgaggtatactatggggcagat
ttagaaacaggaaaatttggaagtgggtttcctaaggcatcatccatggtaactgggagt
gactcagatccatatgtggtgtcaggttggaatctaaataaactgccacgccaaccaggt
tctgttctttgtttcgaagaaagtgatatctctggggttctagtgccatggctctatgtt
ggaatgtgcttctcatctttttgctggcatgttgaggaccaccatctatattcactaaac
tatcatcattggggtgatccaaagatatggtatggagttcctggaagtcatgcttcatct
cttgaagatgcaatgaaaaagcatttaccttacttgtttgaagaacaacctcatttactt
catgaactggttactcaactatctccttcagttctaaaagctgaaggtgtaccagtatat
cgtgccgttcagcattctggggagtttgttcttacctttccaagggcgtaccactctggc
tttaactgtggctttaattgcgcagaggcagtaaatgtcgctccagttgattggttagcg
catggacaacatgcagttgagctttacagcgagcagcgtcgcaagacatcaatatcacat
gataagcttctattgggatcagctcaggaagctgtcaaagctctttgggagctgtcagtt
ttgggaagggaaacaacagtaagtttggggtggaaaagtgtctgcgggaaggatgggatg
ctcacacgggctgttaagagaagggtgcagatggaggaggagagggtaaagtgccttcca
gctcatgtgaaattcctgaagatggaaaaagatttcgatttggaaagtgagagagaatgc
ttctggtgctattatgatttgcacttatctgctaccagctgcaggtgctccgctgaccaa
tttgcttgtcttaaacatgcaaatcttttatgttcatgtgacgtaaaacacagatatgtc
cttctccgatacactgtggatgagttaaacacactagttgaagcattggagggcagttta
gatgctttaaaagtttgggcatctgaaaatcctggaatgatttctgtcaacgaaaaaggt
gtgcctgcagataagctggatgcaaaaagagagtcattcagacatgagaaacaaagtttg
tcatgttctcctgttgtacaagacgttatggaaacttctgctcctatttgttcaagtagt
aatgttttgtcagaagaagtccagtcagctctccaaacttcaagtgcgtctcatgtcact
attgatagccatgtcagcacctcaaataatgatctggtaaagggcgaagaagtaaaggcg
gggaaactaggatgtcccgatttgaatcttgatgttgattctgctgatcatgaaagtgga
gtgctgcatgtatctgaaagctgtgataacaaagctatctcaaaggagataccaatgtca
gtgtgcaagcaaaagaaaatttgcagttcgaactcaacaaaacaaatagatattattgtg
cttgattgcgatttgaattcatctgaatctcatgaaagaaatagaaacttatcttcattt
tcaggagttgttaggcatggctgttcaaatggtggaaaaaagttgtttggggttgatctt
ttggttccaatagaaaattcagtggcatcatcaaacaaattgttgagatctgatgtcgtc
aatatctcagatgtaaaggtcgctgatcaaagctaccttgtaggaaggctggatttttct
gttgtacctttaaattttggatctgtcatgtctgggaagccatggtgcaattcacaggct
atattccccaaaggatttaaaagccgcattaagtatttcagtgtgcataatccagcaaaa
gtttgtagctatatctccgaagtgctggatgctgggttccttgggcctctgtttaaggtt
actttagaagaacatccaaatgagagcttcacagctgcctctgcagagaagtgttgggaa
atggtgttgcagcaagtaaataaagaaattgtacggcgtaaaaactcatgggaaagagat
ctgccccctttgcaagccgtgcagagcattaatggacttgaaatgtttgggtttctctca
ccgcctattattgcggctatcgaggctcttgatcccggccacctgagcagccggtactgg
caagacaggattgctacatcatccggttcaagtgcagtcaaccatcacctatctgatcga
cttttctctgcagtgcaaaaagatgcaaagctttttggtttccatttgaccaaggcaggt
ccgaataatcccgctctaaaagatgaacatttggtgggcgagaataagcggctagcactg
caacaactattcaggaaggcaaatcctgaagaactaaagataatgcataaaattttctgc
agtgaggcacgaagtgctgaatggagagccgcgtacagaacattgactgaagagatggag
aaaaggcgtaggtaa

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