Tripterygium wilfordii (thunder duke vine): 120005712
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Entry
120005712 CDS
T07256
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120005712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
120005712
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120005712
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
LRR_At5g56370
F-box-like
LRR_6
F-box
DUF3630
Motif
Other DBs
NCBI-GeneID:
120005712
NCBI-ProteinID:
XP_038711430
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Position
9:complement(1694247..1698996)
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AA seq
580 aa
AA seq
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MDSKRKRESPESNRSAMFPDEVLERVLSLIESHKDRSSLSLVCKDWYHAERWSRTRVFIG
NCYSVSPEIVARRFPKIKSVTLKGKPRFSDFNLVPENWGADVHSWLVVFASEYPFLEELR
LKRMTVCDESLEFLALNFPNFMGLSLLSCDGFSTDGLAAIAKHCKNLTELDIQDNGIDDR
SGGWLSCFPETFTSLEVLNFGTLNSDVTFDTLERLVARCKSLKVLKVNKNISLEQLQKLL
VCAPQLTEVGTGSFLQELTPSQYSNIEIAFSNCKNLHSLSGLWEVTALYLPVLFSASINL
TFLNLSYAALQGDDLAELLVHCQHLRRLWVLDTVGDLGLEAVGSSCPLLEELRVFPDNPF
DDEGNHGVTEAGFVAVSNGCPRLHYVLYFCRLMTNAAVATVVKNCPDFTHFRLCIMTPGQ
PDYRTNEPMDEAFGAVVKTCKKLQRLSVSGLLTDLTFEYIGMYAKTLETLSVAFAGSSDR
GMECVLKGCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSACNVTMNGCRLLAREMP
RLNVEVMKEDGSDGIQADKVYVYRSVAGPRRDAPPSVLTL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaagaggaagagggaatctccagagtcgaataggtcggctatgttcccggat
gaggtactggagcgagttctttccctaatcgaatctcacaaagaccgtagctcgctctct
ctggtttgcaaggactggtatcacgctgagcgatggtcgcgtacgcgtgtttttattgga
aactgttattcggtctcgccggagatcgttgcccgtcggttcccaaaaatcaagagcgtg
acactcaaggggaagccgcgattctcggacttcaatctggtgccggaaaattggggagct
gatgtccactcttggcttgtcgttttcgcgtccgagtatccctttttggaggagcttaga
ctcaagagaatgacagtatgtgacgagagtttggagtttttggcgttgaacttccccaat
tttatggggctctcgcttttgagctgtgatgggtttagcaccgacggactcgcagccatt
gccaaacattgcaagaatttaactgagctcgacatccaggataatggtattgatgacaga
agtggagggtggctgagctgttttccagaaactttcacctcgttggaggtgctgaacttt
ggaaccttgaatagtgatgtaacttttgatacccttgagagacttgttgcccggtgcaaa
tcattgaaggttttgaaggttaacaaaaatatttcattggaacaattgcaaaagctgctt
gtgtgtgctcctcaattaacagaggttggtactggctcattcttgcaagagctaacaccc
agtcagtattccaatattgaaattgcatttagcaattgcaaaaatctgcatagcctctct
ggtttatgggaagtgacggcactgtatctcccagttctattctctgcctctataaatcta
actttcttgaatttgagctatgctgctttacaaggtgatgaccttgctgagcttcttgtt
cactgtcaacatcttcgacgcctctgggtcctggatacagtaggagacttggggctggag
gctgttggatccagctgtcctttgctagaagaactccgagtttttccagacaatccattt
gatgatgaagggaaccacggggtaactgaagctggtttcgtagctgtgtctaatggctgc
ccaagactccactatgtcctctacttttgccggctaatgaccaacgctgcggtggcaaca
gttgtgaagaactgccctgatttcacccacttccgtctatgcataatgactccaggccaa
ccagattatagaacaaatgaacctatggacgaggcttttggtgcagtagtgaagacttgt
aagaaactccagaggctttcagtttcaggtcttttaacggacttgacatttgagtatatt
gggatgtatgcaaagaccctggaaactctttcagtggcttttgctggcagcagtgatagg
gggatggaatgcgtcctgaaaggttgtccaaagttgaggaagctggagataagggactgc
ccttttggaaatgcagcactactctcaggtttggagaagtatgaatccatgaggtcactt
tggatgtctgcctgcaatgtgaccatgaatggttgtaggcttctggccagggagatgccc
agactgaatgtggaggtaatgaaggaggatgggagtgatggaattcaagctgataaggtt
tatgtttatcgttctgttgctgggcctagaagggatgctcctccttctgtacttactcta
tga
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