Tripterygium wilfordii (thunder duke vine): 120005833
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Entry
120005833 CDS
T07256
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03440
Homologous recombination
twl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120005833
03460 Fanconi anemia pathway
120005833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
twl03032
]
120005833
03400 DNA repair and recombination proteins [BR:
twl03400
]
120005833
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
120005833
DNA replication proteins [BR:
twl03032
]
Eukaryotic type
DNA Topoisomerases
120005833
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
120005833
FA (Fanconi anemia) pathway
120005833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
120005833
NCBI-ProteinID:
XP_038711608
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Position
9:6159455..6187888
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AA seq
863 aa
AA seq
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MAPPNVLMVAEKPSIALSIASVLSHGQMATRRSSVEVHEFDGIFLGIHAHYKVTSVIGHV
FSVDFPATYQDWKVTDPQDLFQAPILKTESNPKAHISRHLSQEARGCEHLVLWLDCDREG
ENICFEVIECTAFRMRDNRRKVYRARFSSVTEKDILKALENLVEPNKNEALAVDARQEID
LKVGVSFTRFQTSYFQGKYGNLDARVISYGPCQTPTLGFCVQRYLQITAFKAEKFWALCP
YVIQDGFEIQLQWERQKLFDFDVATMFHKLVMQDGIVEVLDISEKQETKARPSGLNTVNL
LKVASSALGFGPQMAMQLAERLYTQGFISYPRTESTAYPSSFDFRGTLGLLANSSIWGDC
VRDLLSKGYQKPRSGADAGDHPPITPMRSATEDIVGRDAWRLYQYVCQHFIGTVSSDCKY
IRTKVEFSSGGEYFHCMGLHVTDQGFTCIMPWLALKETNLPQLSKGERIEITKLELYEGN
TEPPNYLSESELISLMEKNGIGTDASIPVHINNICERNYVQVQSGRKLVPTTLGITLVRG
YQCIDPDLCLPDIRSFIEQQINLIAKGQADHSRVVQHVLQQFKQKYIYFVKQIENMDVLF
EAQFSPLADSGCFLSKCGKCLRYMKYISPQPSRLYCNTCEEVYYVPQKGTVKLYKELTCP
LDNFELLLFSLSGPEGKSFPLCPYCYNNPPFEGIDTLFGATKIGSSGKLGKGAGMPCFIC
PHPTCRHSLISQGVCACPECSGTLVLDPVSAPKWRLECNMCNCLVILPQGAHRISTTRER
CSECDSTIIEVDFNKKTTPLEDGATLHAGCILCDELLHSLVEVKHGKSFFKRLGGRGRGR
GMTRRRRGRGSAKVDPKMSFRDF
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcccaatgtcctcatggttgcagaaaagcccagcatcgctctttccatcgct
tctgtactctcacacggccaaatggccacaaggaggagttctgtagaggtacatgaattt
gatggaatatttcttgggattcacgcacactataaggtgacatcagtcatcggacatgtt
ttcagtgtagattttcctgcaacatatcaagattggaaggtcactgatcctcaggatctt
tttcaagccccaattcttaagacagaatcaaacccaaaggctcatatttctagacattta
agtcaagaagctcgcggttgtgaacatttggtattatggttagattgtgatcgagaagga
gaaaacatatgtttcgaagttattgagtgtacagcctttcgcatgcgtgataatcgaaga
aaggtttatcgtgcgaggttttcttctgtaactgagaaagacattttgaaagctttggaa
aaccttgttgaacctaacaaaaatgaggcattggctgtagacgcgcgacaagagatagat
ctaaaagttggtgtctcgtttacaagatttcaaactagttatttccagggaaaatatggg
aatcttgacgccagagttatctcctatgggccttgccaaacccctactcttggcttttgt
gtccagcgatacttgcaaattactgcttttaaggcagaaaagttttgggctttgtgccca
tatgtaattcaagatggctttgaaattcagctacaatgggaacgccagaagttgttcgac
tttgatgttgccacgatgtttcacaaattggttatgcaggatggaatagtagaagtactg
gatatatcagaaaagcaagaaacaaaagctcgcccatctggtctaaacacggtgaatctt
ctgaaggttgcttcaagcgcgttaggctttggacctcaaatggcaatgcagttagctgaa
cgcttgtacactcaaggtttcatcagctatccccgtacagagagtacagcctatccttct
tcattcgactttagaggcacacttggtttactagcaaacagttcaatatggggtgattgt
gtaagggatttgctttctaaaggttatcaaaagccacgatctggagcggatgcgggtgat
catcctccaattactccaatgcggtctgcaaccgaggatattgtagggagagatgcttgg
agactttaccagtatgtctgtcaacattttatagggactgtatcttctgattgcaagtat
ataaggacaaaggtagagttttccagtggtggtgagtacttccattgcatgggattgcat
gttacagatcaaggattcacatgtatcatgccatggttggcattaaaggagacaaatctt
cctcagctatcgaaaggcgagagaatagaaattacaaaactggaactatatgaggggaat
actgaacctcctaactatctcagtgagagtgagctgatttccttaatggagaaaaatgga
ataggcactgatgcatcaataccagtgcatattaataacatatgcgagcgtaactatgtg
caggtacagtctggcaggaaattggttccaactacattggggatcaccctagtaagaggg
tatcaatgtattgatccagatctatgcttaccagatatacgtagttttattgagcaacag
attaatctcattgccaaaggccaggcagatcattctcgtgttgtgcagcatgtcctacaa
caattcaagcagaagtacatctattttgttaaacagattgaaaacatggatgtactgttc
gaggctcaattctcaccacttgctgattcaggatgttttcttagcaaatgtggaaaatgc
ctgaggtatatgaagtacatttcaccccagccatcacgtctatattgcaatacatgcgag
gaggtttattatgttcctcaaaagggcacagtcaagctatacaaggagcttacttgcccg
ttggacaactttgagcttttgctcttttcattgtctggtcctgaaggcaaatcatttcct
ctctgtccatattgctacaataatcctccgtttgaaggcatagacacactctttggtgcc
actaagattggtagctctgggaagctggggaagggagcaggcatgccatgcttcatttgc
ccacatccaacgtgtaggcattctttaatatcccaaggagtttgtgcatgtccagaatgc
tcggggacactagttttggacccagtaagcgctcccaagtggagacttgagtgcaatatg
tgcaattgtcttgttatccttcctcaaggtgctcatcgaatttccactacacgggaacgc
tgctcggaatgtgactcgacaatcatagaagtggactttaataagaaaactacaccttta
gaagacggagctaccttgcatgctggttgcattctttgcgacgagttacttcattccctt
gtggaggtgaagcatggcaagtcgtttttcaaacgcttgggtggaagaggaagaggaagg
ggaatgactagaagaagaagaggacggggttctgcaaaagtagaccctaaaatgtctttc
cgagatttctaa
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