Tripterygium wilfordii (thunder duke vine): 120006013
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Entry
120006013 CDS
T07256
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120006013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
120006013
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120006013
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
120006013
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
120006013
NCBI-ProteinID:
XP_038711819
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All DBs
Position
9:10339864..10341447
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AA seq
372 aa
AA seq
DB search
MENTHIRKVARLLLIRLLEMKNFSETAASSSRKRARLFGNQSEDEEQEEELLTAQNSERQ
SEYAEDLEPYSSTQNSERESEYSEELESYSSAPSSERESEYGEELESSNARHKSNTNGSM
IVSLTEPNVLDCDICYEPLTTPVFQCENGHIACSQCCEQLKNKCPSCALHIGSIRCRAIE
RILESIRVSCQNTSYGCNETSMLYNQKQHHETTCLYAPCPCPFANCDYQSLAKQLSIHLN
ERHPNHLRYLFKYDSTFSIKLDRNVECVVPEEDQEGDLFAITRYTDNLFRVDAVVVSHII
GTTMQRGHPYELTASIDGPDGIRTLKIQSFTRNHVPCNSISDGARPAGRDVARICDEGGH
CGGSGATPPKFF
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacacatataaggaaggtggccaggcttttgctgattaggttattggagatg
aaaaatttctcagaaacagctgcttctagcagccgaaagcgggcaagattatttggaaac
caaagcgaagatgaagaacaagaagaagaactgttaactgcacaaaacagtgaaagacaa
agcgaatatgctgaagatcttgaaccgtactcaagcacccaaaatagtgaaagagagagc
gaatatagtgaagaacttgaatcgtactcaagtgccccaagcagtgaaagagaaagcgag
tatggtgaagaacttgaatcgtcaaatgctcgtcacaaaagcaataccaatggttccatg
attgtttccttgaccgaacctaatgtgcttgattgtgatatctgctatgagcccttgact
actcctgtatttcagtgtgagaatgggcatatagcttgctcccagtgctgcgagcaactc
aaaaacaaatgcccctcatgcgcattgcatatcggctctatccgttgccgggcaatcgaa
agaattctggagtcgatcagagtatcatgtcaaaacacttcctatggatgcaatgaaaca
tcaatgctgtataaccagaaacaacaccacgagacgacttgcctctacgctccatgtccg
tgcccctttgccaattgcgactaccagagtctggcgaagcagttatctatacacttgaac
gagagacatccgaatcacttgaggtatttgttcaagtatgactccacattctcaatcaaa
ttagaccggaatgtcgaatgtgttgtccctgaagaagatcaagaaggtgatctattcgcc
atcacaaggtacacggataatttgtttagggttgatgcagttgttgttagtcacattatt
gggacaacaatgcaacgaggacatccctatgaactcaccgcaagtattgatggacctgat
ggaattagaactctcaaaattcagtctttcacaagaaatcatgttccatgtaatagtatt
agtgatggagctcgtcctgcaggcagggacgtagccaggatttgtgatgagggggggcat
tgtgggggttcgggggcaacgcccccgaaatttttttga
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