Tripterygium wilfordii (thunder duke vine): 120006095
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Entry
120006095 CDS
T07256
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03020
RNA polymerase
twl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120006095
09124 Replication and repair
03420 Nucleotide excision repair
120006095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
120006095
03400 DNA repair and recombination proteins [BR:
twl03400
]
120006095
Enzymes [BR:
twl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120006095
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
120006095
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
120006095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
120006095
NCBI-ProteinID:
XP_038711906
LinkDB
All DBs
Position
9:complement(1967317..1976813)
Genome browser
AA seq
1192 aa
AA seq
DB search
MEEDPEYDPQMMEEEDDSEEITQEDAWTVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
ESSDIEIRPESQHNPGQQPDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL
TYSAPLYVDVTKRVIKKGHDGEEVTETQDFSKTFIGKVPIMLRSSYCTLYENSEKDLTEL
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPHKFAYVAEVRSMAESQNRPPS
TMFVRMLSRTSAKAGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDT
QMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGE
FCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV
RAYVQRCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
AALPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDV
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESGEDGAWHEL
ITKGFIEYIDTEEEETTMISMTINDLVQARFNPEEAYSETYTHCEIHPSLILGVCASIIP
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
PAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
DRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEDAQGQGSRYTRRDHSI
SLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDM
PWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKAL
HKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPA
EGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSF
ECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDEKPPKAPKKKGA
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatccagaatatgatccacaaatgatggaagaagaagacgatagcgaggaa
ataacacaggaggatgcctggacggtaatatcggcctacttcgaagagaaggggctcgtc
aggcagcaactcgactccttcgatgagttcattcagaatacaatgcaggaaatcgttgat
gagtcttccgacatcgagattcggcccgaatctcagcacaaccctggccaacagcccgat
tttgcggagactatctataagatcagctttggtcagatatacttgagcaagcctatgatg
acagagtccgatggagaaactgcaactttatttcccaaggctgcgaggctgaggaaccta
acctactcagcccctttatacgtggacgtcacaaagagggttattaagaaagggcatgat
ggtgaagaagtcacagagacacaagatttctcaaagaccttcattggaaaagtccccata
atgctccgatcaagttattgcacattgtacgagaactcggagaaggatttaacggaactt
ggggagtgtccatatgatcaaggtgggtattttatcatcaatgggagtgaaaaggttctc
atagcacaggagaagatgagtaccaatcatgtttatgtgttcaagaagagacagccacac
aagtttgcatatgtagcggaagttcgatcgatggcagaatcccagaacaggccgcctagt
accatgtttgtgcggatgctttctcgaactagtgctaaagcgggatcttcagggcaatat
attcgtgctacgcttccatacattcgaaccgaaattccgattataattgtgtttcgtgct
ctgggttttgttgctgacaaagacatattggagcacatatgttacgacttttctgatacg
caaatgatggagttgcttcgaccatctctagaagaagcatttgttattcaaaatcaacag
gttgcattagactacattggaaaacgaggatcaactgttggtgtgactaaggagaagaga
attaagtatgcgaaagagatcctacaaaaggaaatgcttcctcatgttggtgttggagaa
ttctgtgagacaaagaaagcttactattttggatatatcatccaccggcttctactttgt
gcactaggccgaagggcagaagatgatagggatcattacggcaataaaaggctggatctg
gctggccctttacttggtggcctgtttagaatgctcttcagaaaactgacaagggacgtg
agagcttatgtgcagaggtgcgttgacaatggaaaagatgttaacctgcaatttgcaatc
aaagcaaaaactatcacaagcggtctcaaatattcactagctactgggaactgggggcag
gctaatgcagctggtacaagggctggagtgtcacaggtgttaaatcgtttaacatatgcc
tctaccttgtcacacttgcgaagattgaattcaccaataggccgtgaagggaagttggca
aaacctcgtcagttacataattcacaatggggaatgatgtgtccagctgagacacctgaa
ggccaagcatgtggacttgtaaagaatcttgcgctgatggtctacataacagttggatca
gcagcgcttccgatcttggaatttttggaagagtggggtactgagaattttgaggaaata
tctcctgcagtgattccccaagctacaaaaatatttgtcaatggttgttgggttggtatc
catcgtgatcctgatatgttggtgaaaactttgagacgtctgaggagaagggttgatgtc
aatactgaagttggggttgttagagatatccgtctgaaggaattgcggatatatactgat
tacgggcgctgcagccgtcctttgttcattgtggagaagcaaagacttttgataaagaag
aaggatatccatgcattacaacaaagggaaagcggggaggatggggcatggcatgagctt
attactaagggatttatagaatatattgacacagaagaagaggagacgacaatgatttcc
atgactattaatgaccttgtacaagctaggttcaatccagaggaggcttattcagaaact
tatacccattgtgagatccacccatcattgattcttggtgtttgtgcttcaatcattcct
tttccagaccataatcagtccccacgtaatacatatcaatctgccatgggtaagcaagcg
atgggaatttatgtcaccaattaccaattccgaatggacacactggcttatgttctctac
tatcctcaaaagccccttgttactacacgagcgatggagcatctccacttcaggcagctt
cccgctggcattaatgcaattgttgccattgcctgctattctgggtacaaccaagaagat
tcagtcatcatgaaccagtcatcaatagatcgtggattctttcgatcactttttttccga
tcatatagggatgaagagaaaaagatgggcacacttgtgaaagaagattttgggcgtcca
gacagagctaacaccatgggaatgaggcatggctcttatgataaacttgatgatgatggt
cttgcacctcctggtacaagagtttctggcgaggatgtaatcattggaaagacaacccct
atttctcaggaagatgctcagggccaaggatcacgatacacaaggcgtgatcatagcata
agtttgcgtcacagtgaaacaggaatggtggatcaagttctattgacaacaaatgctgat
gggttgaggtttgtgaaagtaagagtgagatctgttcgaataccacagattggggacaag
tttagcagtaggcatggtcaaaaggggacagtgggcatgacttatacgcaagaagatatg
ccatggactgtggaaggcatcacacctgatatcattgtgaatccccatgctattccctct
cgaatgacaattggtcagcttattgaatgtataatgggcaaggttgctgctcacatggga
aaagagggagatgccactccttttactgatgtcactgtggacaatatcagtaaagcactt
cataaatgtggatatcaaatgcgtggctttgagaccatgtataatggtcatactggccgt
cgtctcactgctatgatattccttggtcccacatattaccaaagattaaagcacatggtg
gatgacaagatccattcacgaggtcgtgggcccgtgcaaattcttacgaggcaacctgct
gagggacggtctcgtgatggtggtcttcgttttggagaaatggaacgagattgcatgatt
gctcatggtgctgctcactttctcaaagagagattgtttgaccaaagtgatgcatataga
gtccatgtatgcgagcgttgtgggttgatagccattgcaaatctgaagaagaattccttt
gagtgtagaggttgcaagaacaaaactgacattgtccaggtccacattccttacgcatgc
aaactgcttttccaagagcttatggccatggcgatagcaccaagaatgttgacgaaggat
gaaaaaccacccaaagccccaaagaagaaaggagcctga
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integrated database retrieval system
