Tripterygium wilfordii (thunder duke vine): 120006254
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Entry
120006254 CDS
T07256
Name
(RefSeq) transcription initiation factor IIF subunit alpha isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120006254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
120006254
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
120006254
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
120006254
NCBI-ProteinID:
XP_038712151
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All DBs
Position
9:1073767..1082389
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AA seq
541 aa
AA seq
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MSFDLQLKPSCSGCGSNSDLYGSNCKHMTLCLTCGKTMAENRGKCYECGTTITRLIREYN
VRASPSSDKNFFIGRFVSGLPNFSKKKNAENKWSLQKEGLQGRQLTDALREKYKNKPWLL
EDETGLSQYQGQLEGAQSATYYLLMMQGKEFSAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYQRWIMKAATNGAAAFGEVEKLNDEENDSGGGRGRKKKAGDDDEGNVSDRG
EEDEEEEAERNNRLGLNRRGGDDDEEGRRGGDHDLDDDDIEKGDDWEHEETFTDDDEAVG
NDPEEREDLAPDLPAPPEIKEDEDEEDEENGETKLSISGKELKKLLGRTAGLNDSDVEED
DDDDDMEDEGFSPVQAPKQKDALKEEPTDSSPSKPAPSGSARGTPSSKSAKTKRKSNGDD
VKAPNGAPPKKIKTENELKSSAKNESLPASKSGVPPKGATAPPQSSSKVGSTSSTEPVTE
DEIRAVLMQKTPVTTQDLVAKFRTRLKSIEQDKRAFADILKRISRIHKTNNGSGYIVLKD
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgacttgcaattgaagccgtcatgcagtggatgtgggtcgaattcggatttg
tacgggagtaattgcaagcacatgaccctgtgcttgacctgtgggaaaacgatggctgag
aatcgtggcaaatgctatgaatgtggcacgactatcacacgcttgattcgagaatataat
gtccgagcaagtccaagcagcgataagaacttcttcattggtagattcgtgtcagggtta
ccaaatttttcaaagaagaaaaatgctgaaaataaatggtctctgcagaaagaaggacta
caaggtcgccaactcactgatgccttgcgggagaagtacaagaacaaaccctggcttttg
gaggacgagacagggctgtctcaataccagggtcaacttgaaggggcacaatcggcaact
tattacctactgatgatgcaaggaaaagagttttctgccattcctgctggttcatggtac
aactttaataaggttgcacaatataaacaacttaccttggaggaagccgaagaaaagatg
aaaaacaggaaaaagactgcagatggatatcaaagatggattatgaaagctgcaactaat
ggagctgctgcgtttggtgaagtggagaagttgaatgatgaggagaatgattctggtggt
gggaggggacggaaaaagaaagctggtgatgatgatgaaggtaatgtctcagataggggt
gaggaagatgaagaggaggaggctgaaaggaataatagacttggacttaacagaagaggt
ggtgacgatgatgaggaaggtcgaaggggtggcgatcatgatttggacgatgatgatatt
gagaagggtgatgattgggaacatgaagaaacctttacggatgatgatgaggctgttggt
aatgatcctgaggaacgggaagacttggcccctgaccttcctgctcctccagaaataaaa
gaggatgaagatgaggaagatgaagaaaatggggaaacaaaactgagcatatcaggaaaa
gaattgaagaaattactcggaaggactgctggtctgaatgactcagatgtggaagaagat
gatgacgatgatgatatggaagatgagggcttttctcctgtacaggctcccaaacaaaag
gatgcactgaaggaagaacctactgacagtagcccatcaaaaccagcaccttctggttct
gcacgaggaaccccatcttcgaagtcagcaaaaacaaagagaaagtcaaatggtgatgat
gtaaaagcacctaatggagcacctccgaagaagattaaaacagaaaatgaattaaaatct
tctgctaaaaatgaaagtcttcctgcttctaaaagtggtgtgcccccaaaaggtgctaca
gcacccccacaatcatcatcgaaagtaggctcaacatcatctactgagcctgtaactgaa
gatgaaatcagggctgtcttaatgcaaaagacccctgtgaccacccaggatctcgttgca
aagttcaggacacgactgaaatccatagagcaggacaagagagcttttgcggatattctg
aagagaatttctaggattcacaagactaataacgggtctggttacattgtgctgaaagat
aagtga
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