Tripterygium wilfordii (thunder duke vine): 120006305
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Entry
120006305 CDS
T07256
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
twl04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120006305
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120006305
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
twl01009
]
120006305
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120006305
03036 Chromosome and associated proteins [BR:
twl03036
]
120006305
Protein phosphatases and associated proteins [BR:
twl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120006305
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120006305
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120006305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
120006305
NCBI-ProteinID:
XP_038712236
LinkDB
All DBs
Position
9:13605494..13612497
Genome browser
AA seq
515 aa
AA seq
DB search
MNGGEKDAAGPAEKLQPLEWKFSQVFGERSAGEEVQEVDIISAIEFDKTGDHLVTGDRGG
RVVLFERTDARYHGGNRRDLERMDYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQSANGALFLLSTNDKTIKFWKVQEKKVKKICDMNVDLVKAAGNGPIAGSSTSTLSK
PCIANGECTEKLIGRSSTDFEFPSGGIPSLRLPTVVTSHEMSLVARCRRIYAHAHDYHIN
SISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNT
LAYSSSKGSIRLIDLRQSALCDSHSKLFEQPEVPGTRSFFTEIIASISDVKFSKDGRHLL
SRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLQVATGS
YSNLFRVFGCSQGSTEATTLEASKNPMRKQVQTPSRPARSLGNLSRGFRRGADNSGVDSN
GNAYDFSTKLLHLAWHPTENSLACAASNSLYMYYA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaggagaaaaagatgcggctggtcccgctgaaaagctgcaaccgctggagtgg
aaattctctcaggtttttggcgaacggtctgcaggggaggaagtgcaggaagttgatatt
atttctgccattgaatttgataaaaccggggatcaccttgtcactggagatcgtggaggt
cgggttgttttatttgaaagaactgatgcaagatatcatggtggaaatcggagagatcta
gagaggatggattactcaatcagtaggcatcctgagttccgctataagacagagtttcaa
agccatgagcctgagtttgattatctcaagagcttggaaattgaggagaaaatcaataaa
attagatggtgtcagtcagccaatggcgccctatttcttctctcgactaatgacaaaacc
atcaaattttggaaggttcaagagaagaaggttaagaaaatatgtgacatgaacgtggac
cttgtgaaagctgcaggaaatggtcctattgcaggttcgagtacgtcaaccctctcgaaa
ccatgtattgcaaatggagaatgcacagagaaactcattggtcgttcaagcactgatttt
gagtttccatccgggggtatcccatctttgcgtttgcctacggtagtgactagtcatgag
atgagccttgtggcaaggtgtcgaagaatatatgcccatgcccacgactatcacatcaat
tccatttctaataacagtgatggagagacttttatatcggctgatgatttgcgaataaat
ctttggaacttggaaattagcaatcagagttttaatattgttgatgtgaagcctgcaaac
atggaggatctgactgaggtgataacttcggcagaatttcaccctacccactgcaacacg
ttagcatatagtagttcgaaaggctcaatccgactgattgatctgcgacaatcggctcta
tgtgacagtcatagcaaattgtttgagcagccggaggtgcctggcacgaggtcctttttc
accgaaataattgcctcaatctcggatgtaaagttttccaaagatggaagacatttactt
agtcgtgactacatgactctcaagttatgggacataaatatggattctgggcctgttgca
actttccaggttcatgaatacttgagacctaagctctgtgatttgtatgaaaatgattct
atctttgacaagtttgagtgttgtcttagtggagatggacttcaagttgcaactggctcc
tacagcaatctgttccgtgtgtttggttgttcccaaggaagcacagaagcaacgactttg
gaagccagcaaaaatcccatgaggaagcaagtccaaacaccatcaaggcctgctagatct
ctgggcaatctatctcgtggtttcaggcgaggtgcggataactctggagttgattcaaat
gggaatgcttatgatttctcaacgaagctgctacatctggcatggcatccaactgaaaac
tcacttgcgtgtgctgcctcaaacagcctttatatgtattatgcataa
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