Tripterygium wilfordii (thunder duke vine): 120006390
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Entry
120006390 CDS
T07256
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
120006390
04121 Ubiquitin system [BR:
twl04121
]
120006390
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120006390
Membrane trafficking [BR:
twl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
120006390
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120006390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
HypA
Rad50_zn_hook
zf-HC5HC2H_2
zf-C3H2C3
zf_RING_Vps8
CxC4
DUF7573
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-GeneID:
120006390
NCBI-ProteinID:
XP_038712341
LinkDB
All DBs
Position
9:complement(5525615..5527481)
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AA seq
376 aa
AA seq
DB search
MSAPPTAPASYWCYRCSRFVRVWSRDTVICPDCNSGFVEEVDNPPLASQADARRRRFPAA
AMYMVGNRSNPDQSLTPALRRTRRIAGDRSPINPVIVLRGQSDGENESRGFELYYDEGDG
SGLRPLPPSMSEFLLGSGFNQLLDQLLQIEMNGIGRCEHPPASKAAIESMPTIIIDQTHI
AMESHCAVCKEAFELESEAKEMPCTHIYHSDCILPWLSLRNSCPVCRHELPADSHGSPVS
NHSGRLLGSNSEDDSVGLTIWRLPGGGYAVGRFSGARRGGERELPVVYTEMDGGFNGGRV
PRRVSWGARGSRGGREIRGLRHLVRNLFSCFGIGNGNDSGRIENGSRSSNSSSSTGMRIR
SSTTSIRRRGWLMEAD
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaccgccgacggcgccggcgtcgtattggtgttacaggtgcagccgatttgtg
agggtatggagccgcgacaccgtgatttgcccggactgcaacagcggctttgtggaggag
gttgataacccgccgcttgccagccaggcggatgcgcgtcggaggcggttccctgccgcc
gcgatgtacatggtcgggaatcgatcaaatccggaccagagcctgacccctgctctccga
aggacccgccgtatcgccggagaccggtcgccgattaatccggtaatagttctccgtgga
cagtccgatggggaaaacgagagtcggggattcgagttgtattacgatgaaggcgatggc
tctgggttgaggcccttgccgccgagtatgtcggagtttttgttgggatccggttttaat
cagttgctggatcaactcttgcagattgaaatgaacggaataggtcgctgtgagcatcct
ccggcgtcgaaagctgcaatagagtccatgccgacaataatcatcgaccagactcacata
gcaatggaatctcactgtgcagtttgtaaggaagcttttgaattggagtcggaggcaaag
gagatgccatgtacgcacatctaccactccgattgcatcctaccttggctttccctccgc
aattcgtgccctgtttgccgtcacgaattgccggcggatagccatggctcgcccgtgtct
aatcacagcggtcggcttttgggttcgaacagcgaagatgattctgtgggattgacgata
tggagattgccgggaggagggtatgctgtggggagattttcaggggcaagaagaggaggt
gagagggagctgcctgtggtgtacacggagatggacggtgggttcaacggtgggcgtgtg
ccgaggagggtctcatggggtgcaaggggaagtaggggaggaagagagatccgtgggctt
cgtcacttagtccgcaatttgttttcttgttttggtattggaaatggaaatgatagtgga
aggattgaaaatgggagtaggagttcaaattcgagctcgagcactggtatgaggattagg
agtagtacaacatcaataagaagaaggggttggttaatggaggctgattga
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