Tripterygium wilfordii (thunder duke vine): 120006400
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Entry
120006400 CDS
T07256
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04142
Lysosome
twl04144
Endocytosis
twl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120006400
04142 Lysosome
120006400
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120006400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
120006400
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
twl04147
]
120006400
Membrane trafficking [BR:
twl04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
120006400
Exosome [BR:
twl04147
]
Exosomal proteins
Proteins found in most exosomes
120006400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
120006400
NCBI-ProteinID:
XP_038712359
LinkDB
All DBs
Position
2:complement(6420057..6432881)
Genome browser
AA seq
1701 aa
AA seq
DB search
MAAANAPIAMKEALTLPSLGINPQFINFTHVTMESDKYICVRETAPQNSVVIVDMSMPNQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIELKAKVKSHQMPEQVVFWKWI
SPKMLALVTQTSVYHWSIEGDSEPVKMFERTANLVNNQIINYRCDPSEKWLVLIGIAQGP
PERPQLVKGNMQLFSVDQQRSQALEAHAATFATFKVPGNENPSLLISFAAKAFNAGQITS
KLHVIELGAQPGKPSFSKKQADLFFPPDFADDFPVSMQVSQKYGLIYVITKQGLLFVYDL
ETASAVYRNRISPDPIFLTTEASSAGGFYAINRRGQVLLATVNESTIVSFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFSQAKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGMTPPLLQYFGTLLTRGKLNGFESLELSRLVVNQNKKNLLENWLAEDKLDCSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRADPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGHLQTKVLE
VNLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYIRALQHYTELSDIKRVIVNTQAI
EPQGLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQTAKEYAEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDSEIHYKYIEAAAKTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYSNNMLRYIEGYVQKVNPANAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDAHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDVELINVTNKNSLFKLQARY
VVERMDNDLWDIVLKPDNEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAIGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSVDRAVEFAFRVEEDAVWSQVAKAQLRAGLVSDAIE
SFIRADDATQFLEVIKAAEDANEYHDLVRYLLMVRQKSKEPKVDSELIYAYAKIDRLGDI
EEFVLMPNVANLQNVGDRLYDEALYEAAKIIFAFISNWAKLAITLVKLKQFQGAVDAARK
ANSSKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWTELTYLYI
QYDEFDNAATTVMNHSPEAWDHMQFKDIVAKVANVELYYKAVHFYLQEHPDLINDVLNVL
ALRVDHTRVVDIMRKAGHLRLIKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDSLYKDCMEACSQSGD
RDLAEELLVYFIEQGKKECFAACLFVCYDLIRADVALELAWMNNMIDFAFPYLLQFIREY
TGKVDELVKDKLEAVNNVKAKEEEEKEMVAQQNMYAQLLPLALPAPPMPGMGGGFAPPPP
QMGGMGMPPMPPFGMPPMGPY
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagccaatgcccccatcgccatgaaagaggccttgacgttgccgagcctcggc
atcaatccgcaattcatcaattttacgcatgtgactatggaatcggacaagtacatatgt
gttagggaaactgcaccgcagaacagcgtcgtgatcgtcgatatgagcatgcctaatcaa
cctcttagaagaccgatcaccgccgattctgccttgatgaaccccaactcccgtattctc
gcacttaaagcacaactacctggaacaactcaggatcacttacaaatatttaacattgaa
ctgaaagctaaagtgaagtcgcatcaaatgcctgagcaggttgtgttttggaaatggatt
tcccctaaaatgctagccctggtcacacagacatctgtatatcattggtcaattgaaggt
gattcagagcctgtgaagatgtttgaaagaacagccaatctagtgaacaatcaaataatt
aactatcgttgtgacccttctgaaaaatggttggtcctgattggaatagcccagggtcca
cctgagagaccacaattagtcaaagggaatatgcagcttttctctgtggatcagcaacga
agtcaggctttggaagcacatgctgcaacgtttgctacattcaaagtgccagggaatgag
aatccttcacttctaatttcctttgctgctaaggcattcaatgctggacaaataacatca
aagctacatgttattgaacttggtgcccagccaggtaaaccatcatttagcaagaaacaa
gcagatttattttttcctccagacttcgccgatgactttcctgtgtcaatgcaggtatcc
caaaagtatggtttgatttacgtgatcacaaaacaaggattactgtttgtgtatgaccta
gagacagcttctgctgtttatagaaaccgaatcagtccagatcctatttttttgacaact
gaggcttcttcagctggtggcttctatgccatcaacaggcgagggcaggttctgcttgcc
actgttaatgaatccacaattgtatcttttgttagtggtcagttgaacaatttagaactt
gctgttaacctggccaaaagaggaaatcttcctggtgctgagaatttggttgtccagcgg
ttccaggaattgttttcccaggcaaagtataaggaggctgcggaacttgctgctgaatca
ccacagggtatccttcgcactcctgacacagttgctaaattccagagtgttcctgtgcaa
gctgggatgacaccacctttgttacaatacttcggaaccttgttgactagaggaaaactt
aatggttttgagtcactggagttgtcacgccttgttgtaaatcaaaacaaaaagaatctc
ttggagaactggctggcagaagacaagctcgattgtagtgaggagcttggagatctagtc
aagactgtggataatgacctcgcattgaaaatatatatcaaagctcgggcaactccaaaa
gttgttgccgcatttgctgagaggagagagtttgataagattctcatatactcgaaacag
gttgggtacacaccagattatttgttccttttgcaaacgattttgcgagccgacccccag
ggtgctgttaattttgctcttatgatgtcccaaatggagggaggttgtccggttgactac
aacactataacagatctattccttcagcggaacttgattcgcgaggcaacagcttttttg
ttggatgtgctgaagccaaatttaccagagcatggacaccttcaaacaaaggttttggaa
gtcaatcttgtgacatttccgaatgttgctgatgccatattagccaatggtatgtttagt
cactatgatcgtccacgagttgctcaactttgtgaaaaagctggcctctatattagagcc
ctgcagcattacactgagttatccgacattaaacgcgtcattgtgaatacgcaggccatt
gagcctcagggtcttgtggagttttttgggacgctttctcgggaatgggctctcgagtgt
atgaaggatcttctgctagtcaatcttagggggaatctgcagattattgtgcagactgca
aaagaatatgctgagcagttgggtgttgatgcatgtatcaaactctttgagcagttcaag
tcatatgaaggactttattttttcttgggttcatatttgagctccagtgaggattctgaa
atccactacaagtacatcgaagcagctgctaaaactgggcaaatcaaggaggtagaacgg
gtgactcgtgaatcaaacttttatgatccggaaaagacgaaaaactttttgatggaagcc
aagcttccagatgcacgtcctttgattaatgtatgtgatcgatttggttttgttccggat
ctcacccactacctgtactcaaacaacatgctgcgatatattgaaggttatgttcagaag
gtcaatccggcaaatgctcctttagttgttggacagctgctagatgatgaatgtcctgaa
gatttcatcaaaggtcttattctttcagtgcgctcccttcttcctgttgagcctctagtg
gaggaatgtgaaaagaggaatcggttacgcctactcactcagttcttggagcatctcgtg
agtgagggcagccaagatgcacatgttcacaacgcgctcggtaaaatcatcatagatagt
aacaacaatccagaacattttcttactaccaacccatattatgattcacgtgttgtgggt
aaatattgcgagaagcgtgacccaacactggcggtcgttgcctaccgtcgagggcaatgt
gatgttgaacttatcaatgttacaaataagaactccctgtttaaattgcaggccagatat
gttgtggaaaggatggataatgacctttgggacattgttcttaagcctgataatgagtat
aggaggcagctaattgatcaggtcgtatctactgctttgcctgaaagcaagagtcctgag
caagtttctgcggctgttaaagcttttatgactgctgatcttcctcacgagttgattgag
cttcttgaaaagatagtgcttcaaaattctgcttttagtgggaactttaatcttcagaat
cttcttatcctgacagccattaaagctgatccatctagagttatggactatgtcaacaga
ttagacaactttgatggacccgcaattggggaggtggctgttgaagctcaactgtatgaa
gaagcatttgccattttcaagaagttcaacttgaacgttcaggctgttaatgtgctgttg
gataacatccgtagcgttgatcgagctgtggaatttgcattccgtgttgaagaagatgca
gtctggagccaggtggcaaaggcccagctccgagcggggttggtgagtgatgcaatcgag
tcatttatccgtgcagatgatgccacccaatttttggaggtcataaaggctgctgaggat
gcaaatgaatatcatgacttggtgaggtatctattaatggttaggcagaagtctaaggag
cccaaggtcgatagtgaactcatttatgcatatgctaagattgatcgactgggtgatatt
gaggaattcgttctcatgccaaatgttgctaatcttcaaaatgttggagatcggttatat
gatgaagcactttatgaagctgcaaaaatcatctttgcattcatttcaaactgggcgaag
ctggctattacacttgtaaagcttaagcagttccaaggtgctgtagatgcagctcggaaa
gcaaacagctcaaaaacatggaaggaagtctgctttgcatgtgtggatgccgaagaattc
cgattggctcagatatgtggactaaacatcattgtgcaggttgatgatttggaagaagtg
agtgagtattaccagaacaggggatgctttaatgagctcatatccctcatggagagtgga
ctaggattggaacgagcacatatgggcatcttcaccgagttgggagttttatatgcaaga
taccgtcctgagaagcttatggagcatatcaagctgttctcaactcgacttaacattccc
aagcttatacgagcttgtgatgaacaacagcactggacagaattgacatatttgtatatc
caatatgatgagtttgacaatgctgcaaccactgtaatgaaccactctccagaagcatgg
gatcacatgcagttcaaagatattgtggctaaagttgcaaatgtagagctttactataag
gcagtgcacttttacttgcaagagcatcctgatcttattaatgatgtacttaatgttttg
gcccttcgtgtagaccatactcgtgtggtggacataatgcgaaaggcaggtcacctgcgt
cttatcaaaccatacatggttgctgttcagagcaataatgtgtctgctgtaaatgaagct
ttgaatgaaatttatgtagaggaggaggactacgacagacttcgtgaatctatagatttg
catgataactttgatcagataggtcttgcacaaaagattgagaagcatgagctccttgag
atgaggcgtgttgctgcatatatctataagaaagcaggaagatggaagcagtccattgct
ttatcaaagaaagacagtctttataaagattgcatggaagcatgctcacaatctggtgat
cgtgaccttgctgaggagttgcttgtctacttcattgagcagggtaagaaagaatgtttt
gcagcatgcctctttgtgtgttacgacttgatccgcgcagatgttgctcttgagctggca
tggatgaacaacatgattgattttgccttcccctatctcttgcagtttattcgggagtac
actggcaaagtagatgagcttgtcaaggacaagctcgaagctgttaataatgtgaaagct
aaagaggaggaggagaaggagatggttgctcagcagaatatgtacgcacaactgctgcct
cttgctttgcctgcacccccaatgcctggaatgggtggtggttttgccccacctccaccg
caaatgggtgggatgggaatgccaccaatgccaccttttggcatgccacccatgggccca
tactga
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