Tripterygium wilfordii (thunder duke vine): 120006463
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Entry
120006463 CDS
T07256
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Module
twl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120006463
Enzymes [BR:
twl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
120006463
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
120006463
NCBI-ProteinID:
XP_038712443
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Position
9:complement(10579841..10581425)
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AA seq
390 aa
AA seq
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MAAYTYTCSAVLFLLFFTYSHFGAFAAQYNVVTLGATPDGNTDSTKAFMAAWAQACGSTS
PATIYVPKGSFLLGNLDLKGPCKNTAIVVQIDGTLVAPSDLNADNWVIFRDVSGVTVSGG
TLDGQGSSLWACKASGKSCNQGATSLEFTNSDNIVIGGLTSLNSKMFHIVINGCHNVKLQ
GVKVSASGNSPNTDGIHVQRSTGVTISNARIATGDDCVSVGPGTTNLWIENVACGPGHGI
SIGSLGKEAQEAGVQNVTVTGAQFSGTENGVRIKSWGRASNGFARNILFQHCTMTSVQNP
IVIDQNYCPDDKGCPGEASGVKISDVVYQDIHGSSATEVAVKLDCSNKNPCSGITMEDVK
LTYMNKPAQASCVNAGGTDSGPVQPACKGV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatatacttatacttgttcagctgtcttatttctgcttttcttcacatactct
cattttggagcatttgcagcacaatacaatgtggtcactttaggagcaacaccagatggc
aacactgactcaactaaggccttcatggctgcatgggctcaggcttgtggctccacaagc
ccagccaccatttatgtccccaaaggaagtttcttgcttggcaatttggatttgaagggt
ccttgcaagaatactgccattgttgtccaaattgatggtacacttgtggctccttctgac
ttgaatgctgacaattgggtcatcttcagggatgtcagtggtgtcaccgtctctggaggg
acactcgacggccaaggctcatccttgtgggcttgcaaggcttccgggaagagctgtaac
caaggcgctacgtcactggaattcacaaattcagacaacatagtgatcggaggattaaca
tccttaaacagcaaaatgttccacattgtcatcaatggctgccacaatgtgaaattgcaa
ggagtaaaggtgtccgcctcaggaaatagcccaaacactgacggtattcacgtccagaga
tccaccggcgtcacaatctcaaatgccaggattgcaactggtgacgattgtgtctccgtt
ggccctggcaccaccaacctctggattgaaaacgtcgcttgtggccctggtcatggcatt
agtattggaagtttaggaaaggaggctcaagaggctggggtacagaatgtgacagtaacc
ggtgctcaattcagtggaacagagaatggagtgagaatcaagtcttggggaagagcaagt
aatggctttgctaggaacattttgttccaacattgcaccatgaccagtgttcaaaacccg
attgtcatcgatcaaaattattgccctgacgacaaaggttgtcccggagaggcttctgga
gttaagataagcgatgtggtgtaccaagacatccatggatcgtcggcgacagaggttgca
gtgaagttggattgtagcaacaagaacccatgtagtggtattacaatggaggatgtgaag
cttacttacatgaacaaaccagctcaagcctcctgtgttaatgctggtggaactgactct
ggtcctgttcagcctgcttgtaagggagtttaa
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