Tripterygium wilfordii (thunder duke vine): 120006469
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Entry
120006469 CDS
T07256
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
twl01009
]
120006469
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
120006469
Enzymes [BR:
twl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
120006469
Protein phosphatases and associated proteins [BR:
twl01009
]
HAD phosphatases
Fcp/Scp phosphatases
120006469
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120006469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
120006469
NCBI-ProteinID:
XP_038712448
LinkDB
All DBs
Position
9:1910201..1920913
Genome browser
AA seq
986 aa
AA seq
DB search
MNNWFLTSKRSFWRVMDGKMYKSVVYKGDELLGEVEIYPQRQLQEEEEEENKNKKIIDEL
AGREIRISHFSQASERCPPLAVLHTITSSGVCFKMESKNSSSPDTLLNLLHSSCIRENKT
AVMTLGGEELHLVAMYSRNNEKQYPCFWGFSVAAGLYTSCLGLLNLRCLGIVFDLDETLI
VANTMRSFEDRIEALQRKINTEMDPQRISGMLAEVKRYQDDKSILKQYAENDQVVENGRV
VKVQSEVVPALSDNHQPMIRPLIRLQDKNIILTRINPQIRDTSVLVRLRPAWEDLRCYLT
ARGRKRFEVYVCTMAERDYALEMWRLLDPDSNLINLKELLDRIVCVKSGSRKSLFNVFQH
GLCHPKMALVIDDRLKVWDEKDQPRVHVVPAFAPYYAPQAEANNAIPVLCVARNVACNVR
GGFFKEFDEGLLQRIPETSYEDDVKDVPSPPDVSNYLVSEDDSSVSNGNRDSLSFDGMAD
AEVERRMKDALLASSTVSPVVTHLNPRLAPPFQHAMASSSVSVPLPASQAPVVPFSTLPF
PQAAPLVKPLSHVGHPEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDIRDHTPSE
PPFPARPPIQVSVPHTQPRGSWFPAEEEMSPQQLNRAVPKEFALDSEMMHIEKQRSRPSP
FFPKVGNSIPSGRILHENQILPKEGLPKDDRLRLNHTLSNHSLSGDETPTGHSSSSNRYL
EFESRRAISGAETPAGVLQDIAMKCGTKVEFKPGLVASKDLHFSVEAWFAGEKVGEGIGR
TRREAQRQAAEVSIKNLANIYMSRVKPDTGSPNGDVNRFPFVSDNGFSGNVRSFGSQFLP
KEESASFSTASEPSRFADPRLEGSRKSTGAVTALKELCTMEGLGVAFQVQSPPSANMKNN
EVHAQVEIDGQVLGKGIGSTWEEAKMQAAEKALGSLRSMLGQYSQKRQGSPRSLQGMPSK
RLKPEFPRVLQRMPSARYPKNEPAIP
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgaacaattggtttttgacctcaaagcggagtttttggagagtaatggacggaaagatg
tataaatctgtggtgtataaaggggatgagttacttggagaggtggagatatatccacag
cgacagctgcaggaagaagaagaagaggagaacaagaacaagaaaatcatcgatgaattg
gccgggagagaaatcaggataagccacttctctcaagccagtgagagatgtccacccctg
gcggtgcttcataccattacgtctagtggtgtttgcttcaaaatggagtcaaagaactca
tcctcacccgacacgctgctgaatctattgcactcctcctgtatcagagagaacaagact
gcagtgatgactctgggaggagaggagctccatttggttgccatgtactccaggaataat
gaaaaacagtatccatgtttctggggattcagtgttgcagcaggactgtatacttcttgt
cttggcttgctgaatcttagatgtcttggcattgtatttgatctggatgaaactctcata
gttgcaaatacaatgcgctcattcgaggacagaattgaggcattacagcggaaaataaat
actgaaatggacccacaacgcatcagtggcatgctggctgaggtcaagcgttatcaagat
gacaagagcatactgaagcaatacgccgaaaatgatcaggttgttgagaatgggagggtt
gtcaaagttcaatctgaagttgttccagctttgtcagataaccatcagcctatgattcgc
ccacttatacgattgcaagacaagaatattattctgactcgtatcaatccacagattcgt
gatacaagtgtccttgtgagattgagacctgcctgggaggatctgcgatgctatcttaca
gcaagaggacgcaaacgctttgaggtttatgtttgtacaatggctgagagggattatgct
ctagaaatgtggaggcttcttgatccagactcaaatttgataaacttgaaagaactattg
gatcgcattgtgtgtgttaagtcaggttcaaggaagtcgttgttcaatgtctttcaacat
ggattatgccatccgaagatggcgttggttatcgatgatcgcttgaaagtatgggatgaa
aaagatcaacctcgggttcatgttgttccggcattcgctccatattatgctcctcaagct
gaagctaataatgctattcctgtcttatgtgtcgcaagaaatgttgcttgcaatgtcaga
ggaggttttttcaaagagtttgacgagggccttctccaaagaattcctgaaacttcatat
gaagatgatgttaaggatgttccttctcctcctgatgtgagcaactatctagtttcggag
gatgattcttctgtatcaaacgggaatagagattctctgtcttttgatggcatggcggat
gccgaggttgaaagacgaatgaaggatgcacttttggcttcctcaacagtctccccagtt
gtcactcatctgaatccaagacttgctcctccatttcagcatgcaatggcatcttcatct
gtctcagttcctctcccagcttctcaggccccggttgttccattttctactttgccgttt
cctcaggctgctccattggttaaaccattgagtcatgttggccatcctgaaccaagcttg
cagagttctcctgctagagaagagggtgaggtaccagagtcagaattggatcctgatact
aggaggcggctcctcatattgcaacacgggcaagatataagagatcatactccgagtgaa
cctccatttcctgcaagacctccaatacaagtctcagttccacacacacagccacgtgga
agctggttcccagcagaggaggagatgagcccacagcaactgaaccgagctgtacctaaa
gaatttgctcttgattctgaaatgatgcatattgagaagcaacgatctcgtccttcgcct
tttttccccaaggttgggaattctattccatctggtagaattcttcatgaaaatcaaata
ttgcctaaagagggacttcccaaagatgatcgattgaggttaaaccataccttgtctaat
cattctctctcaggtgatgagacccctacaggtcattcatcttccagcaacaggtatctt
gagtttgaatccagacgagctatttctggcgcagaaactccagctggtgttttacaggat
attgccatgaagtgtggaactaaggtggagttcaagccaggtttggttgcaagcaaggac
ctccatttctctgttgaggcttggtttgcgggggagaaagttggtgaaggtattggcaga
acaaggagagaagcccaacgccaggcagctgaggtttctatcaagaacttggctaatata
tatatgtcacgtgttaaaccggatactggatctccgaatggggatgttaataggtttcct
tttgtcagtgacaatggtttttcgggtaatgtacgttcttttgggagtcagttcctgcct
aaagaagagtctgcgtcattttcaactgcatcggagccatctaggtttgcagaccctagg
ttggaaggctcaaggaaatccacaggtgcagtcaccgcactgaaagaattgtgcacgatg
gagggccttggtgtagcttttcaagtgcagtctccaccttcagcaaatatgaagaacaat
gaagtacatgcacaggtagaaattgacggacaggttctagggaagggaattggttcaaca
tgggaagaagctaagatgcaggctgctgagaaggcccttggaagtctaagatcaatgctt
ggtcagtacagtcagaaacgtcagggttccccaaggtcattgcaaggaatgcctagcaaa
cgtcttaagccggagtttccacgtgttctacagcgaatgccttcagccagatatcccaag
aatgaacccgccattccttga
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