Tripterygium wilfordii (thunder duke vine): 120006669
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Entry
120006669 CDS
T07256
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Module
twl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120006669
Enzymes [BR:
twl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
120006669
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
DUF3737
Motif
Other DBs
NCBI-GeneID:
120006669
NCBI-ProteinID:
XP_038712728
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Position
9:10587768..10589325
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AA seq
387 aa
AA seq
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MAAYTYTSSVVLFVLFFTCFLLGAFAAQYSVVTFGATPDGTTDSTEAFMAAWAQACGSTS
PATIYVPKGSFLLGNLDLKGPCKNTAVVVQIDGTLVAPSDLNADNWVIFRDVSGVTVSGG
TLDGQGSSLWACKASGKSCNQGATSLEFTNSDNIVIGGLTSLNSKMFHIVINGCHNVKLQ
GVKVSASGNSPNTDGIHVQGSTGVTISNARIATGDDCVSVGPDTTNLWIENVACGPGHGI
SIGSLGKEAQEAGVQNVTVTSAQFSGTENGVRIKSWGRASNGFARNILFQHCTMTSVQNP
IVIDQNYCPDDKGCPGEASGVKISDVVYQDIHGSSATEVAVKLDCSNKNPCSGITMEDVK
LTYKNKPAQASCVNAGGTDSGPVAACL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatatacttatactagttcagttgtcttatttgtgcttttcttcacatgcttt
cttttaggagcatttgcagcacaatacagtgtggtcacttttggagcaacaccagatggc
accactgactcaactgaggccttcatggctgcatgggctcaagcatgtggctcaacaagc
ccagccaccatttatgtccccaaaggaagcttcttgcttggcaatttggatttgaagggt
ccttgcaagaatactgccgttgttgttcaaattgatggaacacttgtggctccttctgac
ttgaatgctgacaattgggtcatcttcagggatgtcagcggtgtcaccgtctccggaggg
acactcgacggccaaggctcatccttgtgggcttgcaaggcttccgggaagagctgcaac
caaggcgctacgtcactggaattcacaaattcagacaacatagtgatcggaggattaaca
tccttaaacagcaaaatgttccacattgtcatcaatggctgccacaatgtgaaattgcaa
ggagtaaaggtgtccgcctcaggaaatagcccaaacactgacggtattcacgtccaggga
tccaccggcgtcacaatctcaaatgccaggattgcaactggcgacgattgtgtctccgtc
ggccctgacaccaccaacctctggattgaaaacgtcgcttgtggccccggtcatggcatc
agtattggaagtttagggaaggaggctcaagaggctggggtacaaaatgtgacagtaacc
agtgctcaatttagtggaacggagaatggagtgagaatcaagtcttggggaagagcaagt
aatggctttgccaggaacattttgttccaacattgcaccatgaccagtgttcaaaacccg
atagtcatcgaccaaaattattgccccgacgacaaaggttgtcccggagaggcttctgga
gttaagataagcgatgtggtataccaagacatccatggatcgtcggcgacagaggttgca
gtgaagttggattgtagcaataagaacccatgtagtggtattacaatggaggatgtgaag
cttacttacaagaacaaaccagctcaagcctcctgtgttaatgctggtggaactgattcg
ggtcctgttgcagcctgcttgtag
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