Tripterygium wilfordii (thunder duke vine): 120006872
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Entry
120006872 CDS
T07256
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Module
twl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120006872
Enzymes [BR:
twl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
120006872
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120006872
NCBI-ProteinID:
XP_038712917
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All DBs
Position
10:complement(10490431..10492636)
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AA seq
334 aa
AA seq
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MNVPSGKKFLVKPVTFQGPCKATNIAMQVRGRILAPKNISDWGPTTYLLFFTSVNGLTLA
GTGIIDGQGSDWWTKCAADFLSQSSCPRPRLLQMNQCNNFEIKGLQMMNSPSIVVSVHDC
TNSSISNVNITNPATSPNTDGIDIGSSTQIKIIDSVIRTGDDCIAIASGSHFNISGISCG
PGHGISIGSLGYGGRSAAVEEVHVHHSTFQGTQNGARIKTWQGGKGYAKKITFEHITLVD
AGNPIIIDQYYCPDENCQNKTSAVQISGVSFIGFNGTTSTPDQAIQLRCSRTVPCTDILL
EHVHINSQTPTEATCINAHGRSIDTVPKVDCLLS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaccaagtggaaagaagttcttggtgaagccggtgacgtttcaaggtccatgc
aaagctaccaacattgctatgcaagttcgaggaagaattctggctcctaaaaacatatcc
gactggggtccaactacatatttattgttctttaccagtgtcaatggacttaccttagcc
ggtaccggaatcatcgacggccaaggctccgactggtggacgaaatgcgccgcagatttc
ttgagccagagcagctgtccaagacctcgtttattgcaaatgaatcaatgcaacaacttt
gagatcaaaggattacagatgatgaacagcccaagtattgtggtctctgtacatgattgt
acaaattcatcaatctcaaatgtcaatattacaaaccctgcaactagtcccaacactgat
ggcattgacatcggcagctcaacccagataaaaattattgacagcgtaattcgaactggt
gatgactgtattgcaatagcatcagggtcacatttcaacatttctgggataagttgtggt
cctggtcatggaataagcattggaagcttgggttatggtggaaggagtgctgcagtggaa
gaggtacatgtacaccattctacttttcaagggactcaaaatggagccagaatcaaaaca
tggcagggagggaaagggtatgccaagaaaatcacattcgagcatattacactggtagat
gctggaaaccccataatcattgaccaatattactgtccagatgaaaactgtcaaaacaag
acatcggcagttcaaataagtggtgtttcattcatcggattcaatgggacaacctcaaca
cctgatcaggcaatccagctgagatgcagccggaccgtgccgtgcaccgacatcttactt
gaacatgttcatataaattcccagacaccaacagaagccacttgcatcaacgctcatgga
agatcaattgacacagttcctaaagttgattgtttgttatcctga
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