Tripterygium wilfordii (thunder duke vine): 120007269
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Entry
120007269 CDS
T07256
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Module
twl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120007269
Enzymes [BR:
twl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
120007269
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Nab2-zf4
Motif
Other DBs
NCBI-GeneID:
120007269
NCBI-ProteinID:
XP_038713398
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Position
10:4338115..4340749
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AA seq
440 aa
AA seq
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MRRKEQKKEIEASTHALDRTCGGYFSPTKELSALATYAPVSPFSRQLEPMTSWCIALLFI
VFVSKPSFSAPITYNVLSYGAKPNGVKDSTQAFLDAWSDACGSNKSTVIYVPKGRYMVGS
MVFKGVCKSSDIAFRVDGTLVAPADYNVLGKAKSWLSFEGVSGVSILGGALDAGGSLLWA
CKLGPRSNNCPNGATTLSFTNSNNIQISGLMSINSQMFHIVINGCQNVHIERAKVIAAGD
SPNTDGIHVQYSTNVEIISSSIKTGDDCISIGPGTKNLWIEHVTCGPGHGISIGSLGKEL
DEEGVQNVTVKRTIFSGSTNGFRIKSWARPSNGFVQGVRFIGAVMQNVQNPIIIDQHYCP
HNLKCPNRVSGVRINDVMYQGIRGSSATSIAIMLDCSSKYPCTNIKLQNVHLTYMNRAAQ
SSCANAVGKTLGLVKPDSCL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaaaggaacaaaagaaggaaattgaggcaagcacacatgcactagatcgtaca
tgtggtggatatttttcgcccaccaaggaactgtccgctctggccacctatgcaccagtt
agtccattctcccgccaactcgaacccatgacctcttggtgtattgcacttctcttcatt
gtatttgtatcgaaaccctccttctcagcaccaattacatacaatgtgttaagctatgga
gccaaaccaaatggcgtgaaggactcaacgcaagcatttcttgatgcatggagcgatgcc
tgtggttctaataaatcaacggtgatctatgtccccaaaggaaggtacatggttggatct
atggtcttcaaaggagtgtgcaagagctctgacatcgctttccgagtcgatggaacgctt
gtggctcctgcggattataatgtattagggaaagctaagagttggcttagttttgaagga
gtgagtggtgtttccattttaggtggagctcttgatgctggaggttcactcttgtgggct
tgtaaattgggcccaagaagcaacaactgccctaatggagctacgacattgagcttcaca
aattcaaacaatattcagataagtggattgatgtcgattaacagccaaatgtttcacatt
gtgatcaatggctgtcaaaatgtgcacattgaaagagctaaagtcatagcggcaggggac
agtcccaatactgatggcatccatgtccagtattccacaaatgttgagatcatatcttct
tctatcaaaactggggatgattgcatctctattgggcctggtaccaagaacttgtggata
gaacatgtcacgtgtgggccgggccatggaattagtattggaagcttgggcaaggaattg
gatgaagaaggggtacaaaatgtaacagtgaagagaaccatttttagtggcagtacaaat
gggttcagaataaagtcatgggccaggcccagcaatggatttgttcaaggggttagattc
attggtgcagttatgcagaatgttcaaaaccctatcatcatagaccaacattattgccca
cataatctaaagtgccctaatcgggtttcgggtgtcagaatcaatgacgtgatgtatcaa
ggaatccgaggttcatcagcgacatcaatagctataatgttggattgtagctctaaatac
ccatgcacaaacataaaattgcaaaatgtacacttgacttacatgaatcgggcagctcaa
tcatcatgtgccaatgcagtagggaagacgctggggttggttaagccagatagttgttta
taa
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