Tripterygium wilfordii (thunder duke vine): 120007347
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Entry
120007347 CDS
T07256
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Module
twl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120007347
Enzymes [BR:
twl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
120007347
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
120007347
NCBI-ProteinID:
XP_038713471
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Position
10:complement(8378166..8381099)
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AA seq
398 aa
AA seq
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MQQRILFIFFNLLAINWDQKTGECQVIPPNVVDVVDHGAVGDGIADDTQAFLDAWAAVCG
SASSLPILVPTMTTFLLHPVTFKGPCQSPTIYLLLDGNIVAPDMASWTGDDKSKWIVFSN
VQGLSIIGDGTIDGRGSNWWQSNLDAHQRPIGTMFQNCNKLQLQGFTHINSGSLHISIAD
SNGVSISNLHVFAPESSPNTDGIDISRSSNVDIRVTDIGTGDDCIAIGGGSSYINITSVS
CGPGHGISIGSLGANGGVDTVEQVSVKNCTLAGTTNGARIKTWQGGSGFARRILFNEITL
TNVTNPILIDQFYCPYGTCINETSAVEVSDVSFIGFHGTSSTENAITLECSEIKGCSNII
LDDINIVHVVPGQVTQASCFNAHGTSGVTTPAIDCLSA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagaggattttgtttatcttcttcaatttgctagccattaattgggatcagaaa
actggagaatgccaagtaattcctcctaatgttgttgatgttgtggaccatggagctgtt
ggagatggaattgctgacgatacacaagcttttttagatgcatgggcagctgtatgtgga
agtgcatcaagtcttccaattcttgtaccaacaatgacaacattcttgcttcacccagta
actttcaaaggtccatgccagtcccccaccatttatctcctgctggatggtaatattgtg
gcaccagacatggcatcatggactggtgatgataaatcaaaatggattgtattctcaaat
gtacaaggacttagtatcataggagatggaacaatcgacggtcgaggatcaaactggtgg
caatccaaccttgatgcccatcaaagaccgatcggcactatgtttcaaaactgcaacaaa
cttcaactccaaggattcacccatataaacagtggaagcctccatatttccatagctgat
agtaatggagtatccatctctaatctccatgtatttgccccggaatcaagccctaacact
gatggtattgacattagtcgctcttctaatgttgatattagggttaccgacatcggaacc
ggtgatgattgcattgcaattggagggggttcctcatacattaacataactagtgtatca
tgtggaccgggccatggtataagtattggaagtttaggagcaaatggaggagtagatacc
gtagaacaagtgtccgtaaaaaactgtaccttagccggaactacaaatggagcaaggata
aagacatggcagggtggctctggatttgctaggagaatattgttcaatgaaatcacactt
actaatgtcacaaatcctatattgatcgatcagttctattgtccttatggcacctgcatc
aacgagacatcagcagttgaagtgagtgatgtgtcttttattggatttcatggcacatca
agcacagagaacgcaataacattggaatgcagtgaaatcaaaggctgctccaatattata
cttgatgacatcaacatagttcatgtggttccaggacaagtcacacaggcttcttgcttc
aatgctcatggaacatctggtgttacaactcctgcaatagattgcctgtcagcctaa
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