Tripterygium wilfordii (thunder duke vine): 120007457
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Entry
120007457 CDS
T07256
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
twl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120007457
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120007457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120007457
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
120007457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
120007457
NCBI-ProteinID:
XP_038713622
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Position
10:737235..742391
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AA seq
649 aa
AA seq
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MDPTAEEQIDYGDEEYGVSQKVQYQGGGAISALADEEMMGEDDEYDDLYNDVNVGEGFLQ
MHRSEAPPPANFGNGGLQAQKIDVPDPKVQAGSTHGLSNSEVAVERQYSNTGTGFPEQGV
QLPIKGQGLGSTGYPDGSSILQKGQVLEIARDAQVRNVGFQGSTSVPPNIGVDIAGMPGR
MSNNLAPALNPLSGAPQGVPQIPTNQTGMNANVNRLNEIEIRPSVDNGLTMLYVGELHWW
TTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPNAAAACKEGMNGHLLNGRA
CVVAFASPQTLKQMGASYSKNQPESQSQPQGRRPTNDGMGRGNNMNYQGGDGGRNYGRGS
WGRGGQGMLNRGPGGGGHMRGRGGMGAKNMGGAGIGGPAGGGGYGQGLAGPAFGVPGGGM
MHPQGMMGAGFDPTYMGRGGYGGFPGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFARGM
APNGMGMMGSSNMDGHHAGMWADSSMGAWGGEEQDRRTRESSYGGDDGASEYGYGEVNHE
KGGRPTAASREKDRGSDRDWSGNTDRRQRDEREQDWDRPEREHRYREEKEKDNSRDHRQR
ERDSGYKDDWDRGQSSSRPRSRSRAMPEENHRSRSRDVDYGKRRRMPSE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggacccaacagctgaagagcaaatagattacggtgatgaagaatatggagttagtcag
aaggtgcagtatcaggggggtggagcaatatcagcacttgcagatgaagaaatgatgggg
gaagatgatgagtatgatgacctatacaatgatgttaatgttggagagggcttcctccag
atgcaccgatctgaggctccacctcctgctaatttcggtaatggaggactccaagctcag
aaaattgatgttcctgatccaaaggttcaagctgggagcacacatgggttaagtaattct
gaggttgcagttgaaaggcagtattctaacactgggacgggttttcctgagcagggagtc
caactgcccattaaaggacagggattgggatctactggctacccagatgggtcttctatt
ttacaaaaagggcaggtcttggagatcgctcgtgatgctcaagtccgaaatgttgggttt
cagggttcgacttctgtgccaccaaacatcggggttgatattgccggtatgcctgggaga
atgtccaataacctcgcacctgctctgaatcctctgtctggagctccacaaggtgttcca
cagattccgactaatcaaactggcatgaatgcaaatgtgaatcgtcttaatgaaattgag
atcagaccatctgtagataatggattgaccatgctctatgttggtgaattgcattggtgg
acaactgatgcagagctagagagtgttttatctcagtatggaagagtcaaggagattaag
ttctttgatgagagagctagtggtaaatccaagggatactgtcaagttgagttctatgac
cctaatgctgcagctgcttgcaaagaaggaatgaatggccatcttttgaatgggcgagct
tgtgttgttgcctttgcttctccacaaacactgaagcagatgggagcctcttatagcaaa
aaccaacccgagtctcagtctcagcctcagggaaggaggcccacgaatgatggtatgggg
agaggtaataatatgaattatcaaggtggagatggagggaggaactatggaaggggctct
tggggacggggtgggcaaggaatgctaaatagaggtccagggggtggtggtcatatgcgg
ggaagaggaggtatgggtgcaaagaacatgggtggggctggaataggaggtccagctggt
ggtggaggctatggacaaggccttgcaggtcctgcatttggagttcctggtggtggtatg
atgcatcctcaaggtatgatgggagctggatttgatccgacttatatgggtcgtggtggt
tatggagggtttccaggccctggttttcctggcatgcttccttcatttcctgctgttaat
gcaatgggactggcaggggtggctcctcatgtaaacccagccttctttgcccggggaatg
gcacctaatgggatgggaatgatgggttcctcaaatatggatgggcatcatgcaggaatg
tgggctgattctagcatgggagcatggggaggagaagagcaagatcggagaacaagggag
tcaagttacggtggtgatgatggtgcttctgaatatggctatggagaggtgaatcatgaa
aagggaggtaggccaactgctgcttctcgggaaaaggatagaggttctgatcgtgactgg
tcagggaacactgataggaggcagcgagatgagagggaacaagactgggataggcctgaa
agggagcatcggtatcgggaagaaaaagaaaaagataattcccgtgaccatcggcaaaga
gaacgcgactctggttacaaggatgactgggacagagggcaatcttcttctagaccacgg
agcaggtcgcgtgcaatgccggaagaaaatcataggtctcgatcaagggatgtggattat
gggaagaggagacgcatgccgtcagagtga
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