Tripterygium wilfordii (thunder duke vine): 120007488
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Entry
120007488 CDS
T07256
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120007488
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120007488
Surveillance factors
Other surveillance factors
120007488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
120007488
NCBI-ProteinID:
XP_038713668
LinkDB
All DBs
Position
10:complement(1157122..1165887)
Genome browser
AA seq
1570 aa
AA seq
DB search
MAERKLDLPVNLLPCKVEAPGGNDEAKGHSGLLDESKDQVASESSIPLSPQWLYAKPSET
KMEIRVPISVSLGNSIDSNQKDGQRLDGSEEKKDWRRTAAESENSRRWREEERETGLIGG
RRDRRKAECRVDNISTRETTDNRVLPASGRWHDGSSRASLHELRRDNKWSSRWDPEDKEK
DSRVEKRTNVDNEKEDSHSDIQSFAASNRLASERESDSRDKWRPRHRMEAYSGGSTSFRS
EAGPGQERGHLKGSNIKFTLGRGRSNTVGTIGTVHSDKTGKVLGKPSPGAVTFCYPRGKL
LDIYRKQKIDASFMNMSHEMEESPSITHVDSIEPLAFVAPNIEEEVVLNDIWKGEVSNSE
VVYDSFKKGGSSEYFKGNLGSTEEKEVTATPVLAEETLDILHEAANDDAFLAGEKRVHLD
EGKDRINATFLIPDSNGLISTVSKNNAIEINRGYHTNLQSTIDEKHQTVDSAFTEHSKFD
DTESASSFDMRLKLPDDSHSLFVLPSQEENPSSSMEDIGGNAGMRKLTRDFFSEELTLYY
IDPQGETQGPFSVADVTLWFEEGFFGTDLPVRFADAPEGTPFQELGVIMPHLTRGDGNAK
VTYQISKMEIVDAFGGQLEANLSAASVTNTNSSFMNDPYRPFDESNSHSSQHGQSKFSQS
EPLSQLPQPESQSFHDFFIQDEEIVFPGRTGNVGYPTLKSHGSNPLANSGSHSSLPNELI
EPGGSSQHENKLHPFGLLWSELEGTHTRHTQALDIPLSMARAASFEVMNDSSHVAETWSD
SYRQKAISGPRSYQDPMAAQLLSHMEHESNSFDLADHVMSQNFQQLQIQQRNMLSHTRLN
ESILEQRGQNFMHHQQLANHPTPDLEQLLILQMQQQRQLELQQHQLQQQQQLQQQQKLLQ
ERQQSQVRQVLLEQLLHGQLPDSAHVQSLVDPIRANNALDQIVLEHHLLHELQQRSNHPS
SHIVPSIEQLAQAKFGQAQQQQEHQRDMLELMSRAQHGQMQPLDHQILHQEQQTRKLSMG
LRQHCNMEEDRHIDSVWPTDETDLFLRTFGGTHSVHSMGMNPLDFYQQQQRVPHEEQLLH
LERNLSLQDRLRQGLFETSSLPFERSMSFPSSAPGLNLDVVNSLPHGGDMQESKARMQSA
VQMGTRSSGIHSHNVEYPLVPNQFQTSHLDAFEGRWPDTESNGWLANDWVESKMQQQHIN
SEWQKKELEGKMTAEDSNRWMSGGSDEDKSRQLLMELLHQKSSHQPAELLYMNDGVSYEK
KTPLCSPISDSCEPAKVCAAEKQRSSSERNRKLLVRSEYGTSVEEAFLSSIGETAHSAGK
DSNIIGKPSLNKEYLEVEGGKHVAKIDRTRKDSVAEIPDTLTEKGRSANRGRAPINALSR
HPTIGLIGGGEGRYSDKIGQNNSFTEHIVEDRVPVVSKGQENILLKRPPASRPSSAQEGL
PERLADPVSKGKGPLSGGDGGRRELVLNPSSQALDISSSGMDIRFRPTSSFVDTDVSEPS
FIDMLKSNSNKTLTTEAYATTVASEQLDVAQGSRSGKKKGKKGRQLDPALLGFKVTSNRI
MMGEIHHVDD
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacgcaagctcgatctgcccgttaatcttcttccgtgcaaagtggaagctccc
ggaggaaatgatgaggcaaagggtcacagcggattgcttgacgagtcaaaagatcaagtg
gcatcagaaagcagcataccgttgtcccctcagtggctttatgcaaaaccaagtgagact
aagatggaaatccgtgttccgatttctgtgtctcttggaaactctattgattccaaccaa
aaggatggtcagcgtctcgatggatctgaggagaaaaaagactggaggagaactgctgct
gaaagtgaaaacagccgccgctggcgtgaagaggaaagagaaactggcttaatcggtggt
agaagagatcgaaggaaagcggaatgtcgtgttgacaatatttcaacaagagaaacaact
gacaacagagttttgcctgcttctggtcgttggcatgatggtagcagccgtgcctctttg
catgaactgcggcgtgacaacaaatggtcatcaagatgggatcctgaagacaaagaaaaa
gactccagagttgagaagaggacaaatgtagataacgagaaagaagattctcacagtgat
attcagtcttttgcggccagcaaccgcttagcttctgagcgtgaatcagattctcgtgat
aaatggaggccacgccacagaatggaggcatattctggaggttctacttccttccgttct
gaagctgggcctgggcaagagagaggacatttgaagggttcaaatatcaaattcactctg
ggacgaggaaggtcaaatactgtgggcacaattggtactgttcattcagacaaaactgga
aaagtccttgggaaacctagccctggagctgttactttctgctacccacgtggaaagctg
cttgacatttaccgtaaacaaaagattgatgcttcttttatgaacatgagtcatgagatg
gaggaatcacccagtataactcatgttgacagtattgaaccattagcttttgtcgctcct
aacattgaagaggaggttgttcttaacgacatatggaagggagaggtctccaatagtgag
gtggtatatgactcgtttaagaagggcggatcatctgaatattttaaaggaaatttggga
agtacagaggaaaaagaagttactgccactccagttcttgctgaagagaccctggatatt
ttgcatgaagctgctaatgatgatgcatttctagctggtgaaaaaagggttcatcttgat
gaagggaaagatagaattaatgccacatttcttataccggactcgaatgggctgatttca
acagtttcgaaaaataatgccatagaaattaatagaggttatcatactaatcttcagtca
accattgacgagaagcatcaaacagtagactctgcttttactgagcattcaaagttcgat
gacacagaatctgcctcttcttttgacatgagattaaagcttcctgatgattctcattcg
ctatttgttttgccgtcgcaagaggagaacccaagtagcagcatggaagatattggaggc
aacgctgggatgagaaagttgaccagggattttttctcagaggagttaactttgtactac
attgatcctcagggagagactcagggaccattttctgtagctgacgttactttatggttt
gaagaagggttttttgggacagacttacctgttcgttttgcagatgctcctgaaggaact
ccttttcaagagttgggtgtcatcatgccacatctgacacgtggagacggcaatgctaag
gtcacatatcaaatttctaagatggaaatagttgatgcctttggggggcagctggaggct
aatttatctgcagcatctgtcacaaacaccaattcatccttcatgaatgatccatatagg
ccatttgatgagagcaacagccactcatcccagcatggtcagtccaagttttctcagtct
gaacctttgtcacagttgccacaaccagagagtcaaagctttcatgattttttcatacaa
gatgaagaaattgtttttcctggaagaactggaaatgtgggctaccccactttaaaatca
catggaagtaatcctttagcaaattctggtagtcattcttctcttccaaatgagttgata
gagcctggtgggtcaagtcagcatgaaaacaagttacacccttttggtctattgtggtct
gagcttgaaggcactcatactaggcacacacaagcattggacattcctttgagtatggca
agggctgcctcgtttgaagtgatgaatgattcctctcatgttgctgagacatggtcagat
agttacaggcagaaggcaatctctggccctcgttcatatcaagatcccatggctgctcag
ctgctatcgcatatggaacacgaatccaatagttttgatcttgccgaccatgttatgtca
caaaactttcagcaactgcagatccaacagcggaatatgttgtctcatacacgcttgaac
gaatcaattcttgagcagaggggtcagaattttatgcaccatcagcagctggccaaccat
cctaccccggatttggaacaacttttgatacttcagatgcaacagcagcggcagcttgag
ctccaacaacatcaactgcagcagcagcagcagttacagcaacagcaaaagcttctgcag
gagcgtcaacaatctcaagttcgacaagtgctacttgaacagctgttacatggtcaacta
cctgattctgctcatgttcagtcacttgttgatcctattagagccaacaatgctctagat
caaattgtattggaacatcatctcttgcatgagctacaacaacggtctaatcatccttca
agtcacattgttccatccatagagcagcttgctcaagcgaagtttggtcaggcacaacaa
caacaagagcatcaaagggatatgcttgagctaatgtcgcgtgcacagcatgggcagatg
caaccattggatcatcagattcttcatcaggagcagcagacaaggaagttgtcaatggga
ttgagacagcattgcaatatggaagaagacaggcatattgattctgtttggccaactgat
gaaactgatctttttctcaggactttcggtggtactcatagtgttcactctatggggatg
aacccattagatttttatcagcaacaacagagggtgcctcatgaagagcagctccttcac
cttgagcggaacctatcattacaagaccgacttcggcaagggctttttgagacttcctca
ctgccatttgagcggtccatgtctttcccttcgagtgcaccagggctgaatctggatgtt
gtgaattccttgcctcatggtggtgatatgcaggagtcaaaagcacgcatgcaatctgca
gttcaaatgggaacaaggtcttctggtattcactctcataatgtcgagtaccctttagtt
cctaaccaattccaaacttcacatttggatgcctttgaaggtcgctggcctgacactgag
agcaatggatggctagcaaatgactgggtagaatctaaaatgcaacaacagcatatcaat
tctgaatggcagaaaaaggagttggaaggaaagatgacagcggaagactcaaataggtgg
atgtcgggtgggtctgatgaagacaagtcaaggcaattgttaatggaattactacatcag
aaatcaagccatcaacctgctgagttgttatacatgaatgatggagtatcatatgaaaaa
aaaacgcctttgtgctctcctatttctgattcatgtgaacctgctaaggtttgtgcagct
gagaaacagcggagcagttcagaacgcaaccgaaagctgctcgttagatctgagtatgga
acttctgttgaggaggcattcttgtctagcattggtgagactgctcattcagctggcaaa
gattctaacattattggtaagccatctctgaacaaagagtacttggaggtggaggggggg
aagcatgtggccaaaattgacagaacaagaaaggactcagttgccgagattccagatact
ttgactgagaaaggaaggtcggcaaatcgtgggagggctccaattaatgctcttagcaga
catccgacaattggactcattggtggcggtgaaggtcgttacagtgacaagattggacag
aataattcatttacagaacacattgtcgaggaccgggtgccagttgtttccaaagggcaa
gaaaatattttgctgaaacgccctcctgcctcacgtccttcttcagcccaggagggattg
cctgaacggcttgctgatcccgttagcaagggaaaaggtcctttgagtggtggtgatggg
ggaagacgggagcttgtcttgaacccttcaagccaagctttagacatttcctcatctggc
atggacatccgtttccggcctacctcatctttcgttgatactgatgtgtcagagccatca
tttatagacatgctaaagagtaattctaataagacattgacaactgaagcttatgccacc
acagtggcttccgagcaattagatgtggcacaagggagccgaagtggcaaaaagaaagga
aagaaagggaggcaacttgatcccgctctccttggttttaaagtcacaagcaatcgcatc
atgatgggagaaatccaccatgtagacgattaa
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integrated database retrieval system
