Tripterygium wilfordii (thunder duke vine): 120007617
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Entry
120007617 CDS
T07256
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120007617
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120007617
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120007617
NCBI-ProteinID:
XP_038713889
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Position
10:complement(26705..28868)
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AA seq
435 aa
AA seq
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MAAVKKSFLVLFVLSVAVVVHANIEKADDYWTMRAEEAEKVAEKAYNPNPAGLVNDFNFH
VDKSEKGTNSTRRNLKKYTGKCLATNPIDRCWRCDPNWANNRKRLADCALGFGRNTIGGK
MGRIYVVTDASDNDMVHPEPGTLRHAVIQKEPLWIIFARSMIIRLNQELIMTSDKTIDAR
GANVHIAYGAGITLQFIKNVIIHGLHIHDIVSGSGGLVADSVDHYGIRTQSDGDAISIFG
SSHIWVDHISMSKCKDGLVDVIQGSTAVTISNCHMTHHNEVMLFGASDSYSKDQIMQVTV
AFNHFGKGLVQRMPRCRWGFVHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIAPPDINAK
QVTKRDYSPESVWKSWSWRSEGDLMMNGAYFVQSGHPKSSRRFSNADMIKAKPGTYVTRL
TRFAGSLNCVVGKPC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagtaaagaaaagcttcctcgtgttgtttgtgttgtccgttgctgtagttgtt
catgctaacattgaaaaagcagatgattattggacgatgagagctgaagaagcggagaag
gtagcagagaaggcttacaacccgaatcccgctggccttgtaaatgacttcaacttccat
gtcgacaagtccgagaaggggaccaacagcactagaaggaacttgaagaaatacactgga
aagtgcctggccacgaaccctatcgaccgatgctggcgttgcgatccaaactgggctaat
aaccggaaaagactagctgactgtgcccttggatttggccgcaacaccattggtggcaaa
atggggaggatttatgttgtcactgacgcctcggacaacgacatggttcatcctgaacct
ggaaccttacgtcatgctgtgatccagaaggaaccactttggatcatttttgctcgtagt
atgattattagactcaaccaggagcttataatgactagtgataagaccattgatgctagg
ggtgcaaatgtgcacattgcttatggtgctggtattactcttcagtttataaaaaatgtg
atcatccatggcctacacattcatgacatcgtctcaggcagtggtggtcttgttgctgat
tccgtggaccattatggaataaggactcagagtgatggtgatgccatttccatctttggt
tcctcccacatttgggtggaccatatttcaatgtctaaatgcaaagacggtcttgttgat
gtgatccaaggatcaactgccgttaccatctccaactgtcatatgactcaccacaacgag
gtgatgttgtttggtgcaagcgacagctacagcaaagatcaaatcatgcaagtgactgtt
gccttcaaccattttggcaaaggattggtgcagaggatgccaaggtgccgatggggtttc
gtccatgtagttaacaatgactacactcactggctcatgtatgccattggtggtagccaa
cacccaaccattatcagccagggcaacagattcattgctcctccagatattaacgctaaa
caggtgaccaagagagactattcaccggagagcgtgtggaagtcatggtcatggagatca
gagggagatttgatgatgaatggtgcatacttcgtacaatccggacacccaaaatcaagc
aggcgattctcgaacgcggatatgatcaaagccaagcctggtacttatgtaaccagactt
acacggttcgcgggctcgctcaactgtgtagtaggcaagccttgctag
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