Tripterygium wilfordii (thunder duke vine): 120007840
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Entry
120007840 CDS
T07256
Name
(RefSeq) replication factor C subunit 1-like isoform X1
KO
K10754
replication factor C subunit 1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03030
DNA replication
twl03410
Base excision repair
twl03420
Nucleotide excision repair
twl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120007840
03410 Base excision repair
120007840
03420 Nucleotide excision repair
120007840
03430 Mismatch repair
120007840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
twl03032
]
120007840
03400 DNA repair and recombination proteins [BR:
twl03400
]
120007840
DNA replication proteins [BR:
twl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120007840
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120007840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
AAA_30
RCF1-5-like_lid
PTCB-BRCT
AAA_19
Sigma54_activ_2
Rad17
nSTAND3
AAA_assoc_2
AAA_18
BRCT_2
AAA_5
AAA_14
AAA_16
RuvB_N
Zeta_toxin
Gp44_lid
AAA_24
RNA_helicase
Njmu-R1
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
120007840
NCBI-ProteinID:
XP_038714234
LinkDB
All DBs
Position
2:complement(9165633..9176840)
Genome browser
AA seq
981 aa
AA seq
DB search
MQGDIRKWFMKSHDKGNGNAPKPVQPAQSDLKNPPPAESLSEPVNGGQVSSGRRKTSKYF
AADKTKTEDKIEIEEPSVKRKIKKDSGESPKPPPSKKLHKVEDDDDDFVPDTKKISINVT
PSKKLKSGSGRGITPKLVDNDGSDEDNVKDRESPLKTGGRGRGGRGATGTPAGGRGRGGG
RGGFMNFGDRKDPPHKGEKEVPEGASDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVT
GSVSKKTNYLLCDEDIGGRKSEKAKELGTAFLTEDGLFDMIRASKSEKSTTALEESKKSA
EKSVASLPKKSPKKAEIKSNSLATNVVQKGLSSDTSLAKQKEVKTQCSSLPWTEKYRPKV
PNEMIGNQSVVTQLHNWLAHWNEQFLNTGNKGKGKKQNDSGSKKAVLLSGTPGIGKTTSA
RLVSQMLSFQAIEVNASDSRGKADAKISKGIGGSNANSIKELVSNEALTSNMDSMSKHQK
TVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLALNFRKP
TKQQMAKRLMQVAKGEGLQINEIALEELAERVNGDMRMALNQLQYMSLSMSVIKYDDIRQ
RLLSSRKDEDISPFAAVDKLLGFNGGKLKMDERIDLSMSDPDLVPLLIQENYINYRPSSV
GKDDNGVKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQTGSLASCIFPAALLHGQRET
LEQGERNFNRFGGWLGKNSTTGKNLRLLEDFHVHFLSSRESNVERVTLRLEYLTLLLKRM
TDPLRALSKDKAVKEVLELMNEYSISQEDFDAIVELSKFHGHTNPLDGIPPAVKSALTRA
YNEGSRSRLVKAADLVALPGMRKAPKKRIAAIVEPSVDELGQEKVETLGESEEESSSDTE
DSDTANGEKLQSEFQSLSSKGIQVQVELKGADSKPKKRSAGRGKGGAGSSQKTPSGRGKG
GSESSEKKGGQSSGAGAKRKR
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtgatattagaaagtggtttatgaaatctcatgacaaaggcaatggaaatgca
ccgaagcctgtgcagcctgcgcagagcgatttgaagaatcctcctccagctgagtcactg
tctgagccggtgaatggaggccaagtaagttcaggcagaaggaaaaccagcaagtatttt
gcggcagacaaaacaaagaccgaagacaaaatagaaatagaggaaccctcagttaagagg
aaaataaagaaggacagtggtgaatccccaaaaccccctccctcaaaaaagctgcataaa
gttgaggatgacgatgatgactttgtgcctgacactaagaaaatttccattaatgttact
cctagtaagaaattgaagagtggttcaggtaggggaatcacaccgaaacttgtagataat
gatggaagtgatgaagataatgttaaggatcgtgaatctcctcttaaaactggtggaagg
gggcgtggtggtaggggtgcaacagggacaccagctggtgggagagggcgaggtggtggg
cgaggtggctttatgaattttggagataggaaagatcctcctcacaaaggagaaaaggaa
gttcctgaaggtgcttctgattgtctagctggcttaacttttgtgatcagtggaactctt
gacagtttggaaagagaggaagctgaagatttgattaaacggcatgggggtcgcgtgact
ggatctgtcagcaagaaaacgaattatcttctatgtgatgaagatatcggaggaagaaag
tctgaaaaagccaaagaacttggtactgcctttctcacagaggatggattgtttgatatg
atacgtgcatcgaaaagtgaaaagtcaacgactgcactagaagagtcaaagaaatctgct
gagaaatcagttgcatctttgccaaagaagagccctaaaaaggcggaaattaaaagcaac
tcattggcaacaaatgtggtccaaaaaggtttaagctcagatacctcccttgcaaagcag
aaagaagtgaagacacaatgttcttccttgccttggacagaaaagtacaggccaaaggtt
ccaaatgagatgattgggaatcaatctgtggttacccaacttcataattggttggcacat
tggaatgagcaatttctgaatactggaaataaaggaaagggaaaaaagcagaatgactct
ggttccaaaaaggcggttctgttaagtggaacacctggtatagggaaaaccacatcagca
aggttggttagtcagatgctcagtttccaggctatcgaggtaaatgctagtgacagccgt
gggaaggctgacgctaagatctctaaaggaattggtggaagcaatgcaaattctattaag
gagctcgtaagcaatgaagccctgacttccaatatggatagcatgtcaaagcatcaaaaa
acagtactcatcatggacgaggtagatggaatgtctgctggagatagaggtggagttgct
gatcttattgcaagcataaagatatccaaaattcctattatctgcatctgtaatgaccgc
tacagtcagaaactgaaaagtcttgttaattactgcttggctctcaacttccggaaaccg
acgaaacaacagatggcaaaaagattaatgcaagttgcaaaaggagaaggtcttcaaatt
aatgagattgctcttgaggaacttgcagagagagtgaatggagatatgcgcatggcacta
aaccagttgcaatacatgagcctctctatgtcggttattaagtatgatgacattagacag
cgactactaagcagtaggaaggatgaggatatctcaccattcgcggctgttgataagctg
cttggctttaatggggggaagcttaagatggatgagcggattgaccttagcatgagtgat
cctgatcttgttcctcttctaatacaggaaaattatatcaattatcggccaagttcggtt
ggtaaagatgacaatggggtgaaacgtatgaacttgattgcccgtgctgctgagtctatt
gctgatggtgatatagtgaatgtgcaaattcgaagatatagacagtggcagctctctcaa
actggatccttggcttcttgtatctttcctgcggcattactgcatggacaaagggagaca
cttgaacagggagaacgtaatttcaatagatttggtggttggttgggcaaaaactcgaca
acgggcaaaaatttaaggcttttggaggattttcatgttcattttctctcttcccgtgag
tctaatgtggaaagggtgactcttcgtcttgaatatcttactcttcttcttaaacgaatg
actgatcctcttcgggcgctgtctaaggacaaagctgttaaggaagttcttgagttaatg
aatgaatactcgataagtcaggaggacttcgatgctattgttgagctatcaaaatttcat
ggacatacaaatccactggatggaataccaccagcagtcaaatcagctctgacaagagca
tataatgagggaagcagatccaggttggtaaaagctgcagatttagtcgcacttcctgga
atgagaaaggcccctaagaagcggattgcagcgatcgtagaaccatctgttgatgaatta
ggacaggagaaggttgaaacattgggtgaaagtgaagaagaaagttcctcagacacagag
gactcagacactgccaatggagaaaagctgcagtcggaatttcaaagtttaagttcaaaa
ggaattcaagtacaagtggaattgaagggcgctgattcaaagcccaaaaagagatcagca
ggcagaggtaaaggcggggctggctcttcacaaaagacaccatcaggtagaggaaaagga
ggatctgaatcatcagaaaagaaaggtgggcagagttcaggtgctggagccaaacgaaag
agatga
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