Tripterygium wilfordii (thunder duke vine): 120007919
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Entry
120007919 CDS
T07256
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120007919
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120007919
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120007919
NCBI-ProteinID:
XP_038714334
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Position
10:complement(751752..753843)
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AA seq
407 aa
AA seq
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MAPPLMSLLTLFFASLLLPAPSFISSSPLQDPELVVQEVQESINASRRELGFLSCGTANP
IDDCWRCDPDWEKNRKRLAECGIGFGKRAIGGRDGRLYVVTDPSDNDPVNPRPGTLRYGV
VRDEPLWIVFAGDMVIKLKQELIMNSFKTIDGRGSNVHIAGGPCITIQYVTNIIIHGINI
HDCKRGGNAYVRDSPSHYGWRTVSDGDGVSIFGGSHVWIDHCSLSNCNDGLIDAIHGSTA
ITISNNYMTHHNKVMLLGHSDSYKKDKGMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND
YTQWQMYAIGGSAAPTINSQGNRFYAPNDRNSKEVTKHEDAPRSSWRRWNWRSSGDLMLN
GAFFTPSGAGASSSYAKASSLSAKSSSLVGSITAGAGSLRCRKGRRC
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggctcctccattaatgtctcttttaacactattctttgcttctcttcttcttcctgcc
ccaagcttcatctcctcctcaccacttcaagatcctgaattagtagtacaagaagtacaa
gagagcatcaatgcatcgaggagggaactgggttttctctcgtgtgggacggccaatcct
atcgacgattgttggcggtgcgacccggattgggagaagaaccggaaacggttggcggag
tgtggaatcgggtttggcaagcgagcaatcggcggccgggacgggaggctttatgtagtg
acggatccgagtgacaatgatccagtgaacccaagaccaggtacgctcagatacggtgtc
gtacgagatgagccactctggatcgtcttcgcaggtgacatggtgatcaagttaaaacag
gagttgatcatgaattcgttcaagacaatcgacggtcgaggatcgaacgtacacattgct
ggtgggccgtgcattacgattcagtacgtgacgaacataataatacatgggattaatata
catgattgtaagagaggagggaatgcttacgtgagggactctccaagtcattatgggtgg
aggacagtatcggacggtgatggtgtgtccatctttggaggaagccatgtttggattgat
cattgttctttgtcaaattgtaatgacggtctgattgatgcaatccatggatcaacggct
attactatctctaacaattacatgacacatcataataaggtcatgctgttagggcatagt
gatagttataagaaggataagggtatgcaagtcacaattgctttcaatcattttggagaa
ggccttgttcaaagaatgcccagatgcaggcatggctactttcatgtggtgaacaatgac
tacacacaatggcaaatgtatgcaattggtggtagtgctgctcctacaattaatagccaa
ggcaatagattttatgctcccaatgacagaaacagcaaggaggtgacaaaacatgaggat
gcaccaaggagttcatggaggagatggaattggaggtcgtctggagatttgatgttgaat
ggtgcatttttcacaccatcaggtgcaggagcttcgtctagctacgccaaggcatcgagc
cttagcgcgaaatcatcttcgcttgtgggttcaatcactgctggtgctggttcactgcgt
tgcaggaagggaaggcgttgctga
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