Tripterygium wilfordii (thunder duke vine): 120008109
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Entry
120008109 CDS
T07256
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Module
twl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120008109
Enzymes [BR:
twl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
120008109
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
120008109
NCBI-ProteinID:
XP_038714555
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Position
10:complement(2397056..2398641)
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AA seq
398 aa
AA seq
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MGLKFNAVAAFLVFCILNANAQVFDITKYGAGGGDATQAVQKAWTEACASATPSKLVIPK
GDFNVAQLKLEGPCKAPIEIQLQGTLKAPVSMGNLQNTDGWISISQVEGFTMNGGGVIDG
QGAEAWKKNDCDKNPKCSGLPMNLRLNFITHGMITDVTTKDSKNFHVNVLGCKNITFQHF
TVSAPETSINTDGIHIGRSVGVNIIDTSIQTGDDCVSIGDGSQQVSITGVTCGPGHGISI
GSLGRYPNEEPVKGITVKNCTITKTMNGVRIKTWPASPPGSATDMHFEDITMNEVGNPIL
IDQGYCPYNQCTANVPSKVKISNVSFKNIRGTSSTKVVSKLACSPGLQCDQVVVSDIDLT
YSGPEGAAESQCSNVKPQITGKQNPPACAAPATATATA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgaagttcaatgcagtggcagcttttctggtattctgcattcttaatgcaaat
gcccaggtgttcgatataacaaaatatggcgcaggcggtggagacgccacccaggcagtt
caaaaagcttggacagaggcctgtgcatctgctacaccaagcaaacttgtgattccaaag
ggggatttcaacgtagcgcaattgaaattggaaggaccttgtaaggcacctattgagatt
caactccaaggcacattgaaggccccagtgagtatgggtaatttacagaatactgatggt
tggattagcatcagtcaggttgaaggctttacgatgaatggtggtggagttatcgatggc
caaggcgcggaagcttggaagaaaaatgactgtgacaagaaccccaaatgcagcggcctt
cctatgaatctcaggttaaatttcatcacacatgggatgattacagatgtaaccacaaaa
gatagcaagaacttccatgtcaatgttttgggatgcaagaacattactttccaacatttc
actgtttccgccccggaaacgagcatcaacactgatggaatccacattggacgatcagtc
ggggtcaacattatcgataccagcattcagactggtgatgattgtgtctcaattggcgat
ggcagccaacaagtcagcatcacaggagtgacctgtggaccaggtcatggcatcagcatt
ggaagtctcggaaggtaccccaatgaggagcctgtgaaaggaatcacagtcaagaactgc
accatcaccaagacaatgaacggtgtgaggatcaagacatggcctgcttctccacctggg
tctgcaactgacatgcattttgaggacattaccatgaatgaagttggcaacccaattctc
attgatcaaggctactgtccttacaatcaatgcacagcaaacgtaccatcaaaggtgaag
atcagcaatgttagcttcaagaacatcaggggaacttcttcaactaaagtagtttcaaag
ctggcttgcagtcctggattacaatgtgaccaagttgtggtgagtgacattgatctcaca
tacagtggacctgaaggtgctgcagagtctcaatgttccaatgttaagcctcagattact
ggaaagcagaacccaccagcctgtgctgcccctgccaccgccaccgccacggcttaa
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