Tripterygium wilfordii (thunder duke vine): 120008413
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Entry
120008413 CDS
T07256
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120008413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
120008413
Membrane trafficking [BR:
twl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
120008413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
120008413
NCBI-ProteinID:
XP_038714644
LinkDB
All DBs
Position
11:complement(13728306..13737211)
Genome browser
AA seq
791 aa
AA seq
DB search
MMMLNGAEDEEKWVAEGIAGIQHNAFYIHRALDANNLREALKYSAQMLSELRTSRLSPHR
YYELYMRAFDELRKLEMFFKDESKHGVTVVDLYELVQHAGNILPRLYLLCTVGSVYIKTK
DAPAKDVLKDLVEMCRGVQHPIRGLFLRSYLSQISRDKLQDIGSQYEGDADAVMDAVEFL
LENFTEMNKLWVRMQHQGPGRVREKREKERSELRDLVGKNLHVLSQIDGVDLEMYRDTVL
SRVLEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSELM
ERLSNYAASSPDVLPEFLQVEAFAKLSSAIGKVIEAQVDMPIVGAIALYVSLLSFALRVH
PDRLDYVDQVLGACVKKLSGTPKLEVSRATKQIVALLSAPLEKYNDIVTALTLSNYPRVM
DHLDNETNKVMAMVIIQSIMRNITCISTADKVEVLFELIKGLIKDLDGTAADELDEEDFK
EEQNSVARLIHMLYNDEPDEMFKIICTVRKHIMTGGPKRLPFTVPPLVFSALRLVRQLQV
QDGDVVGEEVPATPKKIFQFLNETIEALASIPTPELALRLYLQCAEAANDCDLEPVAYEF
FTQAFMLYEEEVADSKAQVTAIHLIIGTLQRMNAFGVENRDTLTHKATGYSAKLLKKPDQ
CRAVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMASVTRGSSGPVTLFVEIL
NKYLYFFEKGNPQITSTAIQSLIELITSEMQSDSTTPDPASDAFFASTLRYIRFQKDKGG
IMGEKYDSVKV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgcttaacggagcggaagacgaagagaaatgggtcgcagaggggatcgccggc
atccaacacaacgcattttacattcatcgcgctttggacgcgaacaacctccgagaagct
ctcaagtactcggctcagatgctgtcggagcttcgaacttcgaggctctctcctcacaga
tactacgaactctatatgcgagcttttgatgaattgaggaagctggagatgttcttcaag
gacgaaagcaagcatggcgttacagtcgtagatttatacgaactcgtacaacatgctggg
aacatactgcctagactgtatctcctatgtacggtaggatctgtgtacatcaaaacaaag
gatgcacctgctaaggatgtccttaaagatcttgtggaaatgtgtcgaggagttcagcat
ccaattcgtggactctttcttagaagttacctttctcaaattagcagggataagttgcag
gatattgggtctcagtatgaaggagatgctgatgctgtcatggatgctgtagaatttttg
ctcgaaaatttcactgagatgaacaaactgtgggttcgaatgcagcatcagggacctggt
cgtgtgagagagaagcgggaaaaagaaagaagcgagcttcgtgatcttgtagggaagaat
cttcatgttctcagtcagatagatggtgtggaccttgagatgtacagagacacggtcctt
tccagagttttagagcaggttgttaactgtaaagatgagctcgcgcagtattatttgatg
gactgcataattcaagtctttccagatgagtatcatttacaaacccttgagacattattg
ggggcttgcccccagcttcagccaacagttgacatcaagacagtgctatctgaactgatg
gagcgattgtcgaattatgctgcttccagtcctgacgttttgcctgaattcctgcaagta
gaagcttttgctaaattgagtagtgccattgggaaggtcatagaagcacaggttgacatg
cctattgttggagccatagcgctgtatgtttctcttctttcattcgctctccgagttcat
cctgataggcttgattatgtggatcaagtactgggagcatgtgtcaagaagctatctggc
actccaaagcttgaagtcagtagagcaacaaaacaaattgttgcgcttctgagtgctcca
ttggagaaatacaatgacattgttactgccttgacactttctaactatccccgtgtgatg
gaccaccttgataatgaaacgaataaagtcatggcaatggttataattcaaagcattatg
agaaatattacttgcatttctacagctgacaaggttgaggtgttgttcgaattaataaaa
gggctaattaaggatttggatggaactgctgcagatgagcttgatgaggaggatttcaag
gaagagcaaaattcggttgctcgccttatacacatgctttacaacgatgagccggatgaa
atgtttaagattatctgtactgtgaggaagcatataatgactggaggaccaaaacgcttg
ccttttacagttccgcctcttgtattttctgcactcaggctggttaggcaattgcaagtt
caagatggagatgtagtgggagaagaagttcctgctaccccgaagaaaatttttcagttt
ctaaatgagacaattgaggctcttgcatctattcctacgcctgagctagcattacggctg
tacttgcaatgtgctgaggctgctaatgactgtgatcttgagcctgttgcctatgaattt
tttactcaggcattcatgctatatgaagaggaagtagcggactccaaggcccaggtgacg
gcaatacatctaataattgggacactacagaggatgaatgcttttggtgttgagaacagg
gatactttgacacacaaggccacagggtattctgcaaagctcttgaagaagcctgatcag
tgcagagctgtttatgcttgctcgcatctattttgggttgatgatcaagatggaatcaaa
gatggagaaagggtcttgctttgcctgaagcgggccttgaggattgcaaatgctgctcag
cagatggccagtgtcacaaggggtagtagtgggccagtcacactgttcgttgaaatacta
aacaagtacctctacttttttgagaaaggaaaccctcagatcacaagtacagctattcag
agcctcattgaattaatcactagtgagatgcaaagtgactccacaacccctgatccagct
tcagatgccttttttgctagcacgttgcggtatattcggttccagaaagataaaggtggt
ataatgggtgagaaatatgattctgtgaaggtctga
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