Tripterygium wilfordii (thunder duke vine): 120008454
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Entry
120008454 CDS
T07256
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120008454
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120008454
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120008454
NCBI-ProteinID:
XP_038714705
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Position
11:complement(4912267..4914065)
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AA seq
403 aa
AA seq
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MSSPLPILIFLLTLLTPRFVLSSPVQDPELVVQDVLKSINGSRRNLAYMSCGSGNPIDDC
WRCDPNWESNRQRLADCAIGFGKDAIGGRNGRIYVVTDSGDDNPVNPIPGTLRHAVIQDE
PLWIIFKRDMVIRLNQELVMNSFKTIDGRGASVHIAGGPCITIHYATNIIIHGINIHDCK
QGGNGNIRDSPHHSGWWRVSDGDGIAIFDSKHIWVDHCSLSNCNDGLIDAIHGSTAITIS
NNYFTHHDKVMLLGHSDSYTQDKGMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
EMYAIGGSAAPTINSQGNRFLAPDVRFRKEVTKHEDAPESEWRNWNWRSEGDLMMNGAYF
RQSGAGASSVYARASSLSARPSTLVAGMTTTAGALNCRKGSRC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtcctctccccattttgattttcctcctcactctcctaactcctcgttttgtc
ctctcttcaccagttcaagaccctgaacttgtagtacaagatgtactcaagagcatcaat
ggctctaggagaaacttggcatatatgtcttgtgggagtgggaatccaattgatgactgc
tggaggtgtgaccctaattgggagagcaaccgccaacgattagcagattgtgcaattggg
ttcggtaaggatgcaatcggaggaagaaatggtcgaatctacgtcgttacagactccggc
gatgataatcctgtaaaccctataccaggcactcttagacatgctgtcattcaagatgag
ccattgtggatcattttcaagagagacatggtaattaggcttaaccaagaacttgtgatg
aattctttcaagacaattgatggtagaggtgcaagtgttcacattgccggtgggccatgc
attacaattcactatgctaccaacattatcatccatggcattaacattcatgattgcaag
caaggagggaatggcaacattagagactctcctcaccattccgggtggtggagagtatcg
gacggcgacggaatagccatctttgatagcaagcatatttgggtagaccattgttcgttg
tctaactgtaatgatggactaattgatgcaatccatggctccacagctatcactatttct
aacaactactttacacatcatgacaaagtcatgttgttgggacacagcgactcttacact
caagataaaggcatgcaagtcactattgcctttaatcattttggtgaaggactagtccaa
aggatgccaagatgtcgacatggatactttcacgttgtgaacaatgactacacacactgg
gaaatgtatgctatcggagggagtgctgctccgacaataaatagccaaggaaatcgattt
ctggcaccggacgtgagatttaggaaggaagttacaaagcatgaggatgcaccagagagt
gagtggcgtaattggaactggagatcagagggggatttgatgatgaatggtgcctatttc
aggcaatccggggccggtgcatcatcggtatatgcaagagcttctagcctgagtgcaagg
ccatctactcttgtggctggaatgactaccacagctggtgcacttaactgtaggaagggc
tctcgctgctaa
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