Tripterygium wilfordii (thunder duke vine): 120008650
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Entry
120008650 CDS
T07256
Name
(RefSeq) LOW QUALITY PROTEIN: protein CHROMATIN REMODELING 5-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
120008650
03036 Chromosome and associated proteins [BR:
twl03036
]
120008650
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
120008650
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
120008650
SLIK complex
120008650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
HTH_CHD1_Hrp3
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
120008650
NCBI-ProteinID:
XP_038714971
LinkDB
All DBs
Position
2:8626198..8645257
Genome browser
AA seq
1709 aa
AA seq
DB search
MAFFRNYSGRKVVTEDKDQEHGLDGTCSSVGNEYVDVTSSDKEYDMNMDLRYQSDGEPDE
FGALQSEATAENDAAVVSNSNLQPSGRKSALPGKWGSTFWKDCQPNGLELEEGGGKTDVG
KSRRDHSDVPADEMFSDEYYEQDGKHHNDSMHPKGLDNSIGVNSRLPSRPAFGNNLSRGS
GFLNKHYNDANGGDDDNKGNNDGDAADYEDEDDQDEDDPADADFEPDYGVMSRRAGNKDK
VWGGEDSDEENSSDDDDLDVSDEDNSYYMKKPKGRQQVKSGCNVQSFRECRSLHTSTRPI
KGKTSWAGDEYSAEDSSCDSDDDFKSLTRKDAHLRKGKGRSTSYMNIGAQNSEVRTSSRS
VRKVSYIESEESEDIDEGKRKKSQKEENEEEDGDCIEKVLWHQPEGTAGDASRNNRSTEP
ILLNHLFDSEPDWNEMEFLIKWKGQSHLHCQWKSYSGLQNLSGFKKVLNYTKKVMEDVRY
RKTVSREELEVNDVSKEMDLDLIKQHSQVERIISDRISTDSSGNVMPEYLIKWQGLSYAE
ATWEKDVDIAFAQDAIDEYKTREAAMATIGKMVDLQRKKGKASLRKLDEQPDWLRGGKLR
DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVIVPLSTL
SNWAKEFRKWLPDMNVIVYVGTRASREVCEQYEFYNDKKGGRPIKVNTLLTTYEVVLKDK
AVLCKIKWNYLMVDEAHRLKNREAQLYTTLSEFGTKNKLLITGTPLQNSVEELWALLHFL
DPDKFKSRDDFVENYKNLSSFNENGLANLHMELRPHILRRIIKDVEKSLPPKIERILRVE
MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDIS
TTESSKLERIIWSSGKLVILDKLFVRLHETKHRVLIFSQMVRMLDILADYMSLRGFQYQR
LDGSTKAELRQQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ
AMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKEAKK
GSYFDKNDLSAILRFGAEELFXEDKNDEESKKRLLSMDIDEILERAEKVEEKVEAEADQG
SELLSAFKVANFCSAEDDGSFWSRWIKPEAVTQAEEALAPRAARNTKSYAESNQPERSKR
KKKGSEPQEPHEGVQKRRKVDYSVPSAPMIEGAVAQVGGWSYGNLSKRDALRFSRAVMKF
GNERQISSIVAEVGGAIAAAPPEAQIELFDALIDGCREAVVENLDPEGSVLDFFGVPAKA
NELLTRIQELQLLAKHISRYADPMAQFRALSYLKPSNWSKGCGWNQIDDARLLLGIHYHG
FDSWEKIRLDECLCLTKKIAPAELQHHETFLPRAPNLKDHASALLEMELAAIGGKGTNAK
ARRKSSKKVKENNSNISMPRREKRRNFNSPIVVQTKDRPKKTRKLEPLVKEEGEMSDNEE
VYEQFKEVKWMEWCEDVMVDEIRTLNHLHKLQTTSANLPKEKVLPKIRNYLQLIGWRIDQ
IVADHEEELYRQDRMTTRLWKYVSTFSNLSGERLQQIYSKLKQEREEEVGVXNHFMRQRG
YKTTYQMTEPFRRGRDTGNFEAWKQRRMETDIHSSVQPLPPGPLSNGTHLSDPNSLRILG
AAPSDSRSLGSRMRQSNFPPRQNFSSGID
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atggccttttttaggaactattcaggtcgtaaggttgtaacagaagataaagaccaggaa
catggccttgatggaacttgcagctcagtagggaatgagtatgtagatgtaacttctagt
gataaagaatatgacatgaatatggatcttcggtaccaaagtgatggtgaaccagatgag
ttcggtgccctgcaaagtgaggcaactgctgaaaatgatgctgctgttgtgagtaactca
aatttgcagccttctggcagaaagtcagctctgcctggaaaatggggttcaacattttgg
aaggactgccaacctaatggattagagttagaggagggtggtgggaagactgatgtgggc
aagagtcggagggaccactctgatgtcccagcagatgagatgttttctgatgaatattat
gagcaagatgggaaacatcacaatgattcaatgcatcccaagggtcttgataactctatt
ggggtgaattctcgactgccttcaaggcctgcctttggtaacaatttgtctaggggttca
ggatttttaaacaaacattataatgatgccaatggtggcgatgacgacaacaaaggaaat
aatgatggggatgctgctgattacgaagatgaggatgatcaagatgaagatgacccggct
gatgcagattttgaacctgattatggtgtcatgagtaggcgtgcagggaacaaggataag
gtttggggtggcgaagactctgatgaagaaaatagcagtgatgatgatgatttggatgtc
tcagatgaagataattcttattacatgaagaaacccaagggtaggcaacaagttaaaagt
ggatgcaatgtacaatcttttagagaatgcagatcccttcatacatccactcgaccaata
aaagggaagacatcatgggcaggagatgagtattcggcagaggactctagttgtgacagt
gatgatgattttaagagtttgacaagaaaagatgcacatctgcgaaaaggtaagggtcgg
tccacctcgtacatgaatattggtgctcaaaacagtgaggttcgcacgtctagtaggtct
gttcgcaaggtatcatatattgaaagtgaagagagtgaagatattgatgaaggcaaaagg
aagaaatcccaaaaggaagaaaatgaagaggaagatggagactgcatagaaaaggtgctt
tggcatcagcctgagggcacagctggagatgcttctaggaacaatagatcaacagaacct
attctgttaaaccacttgtttgattctgaaccagattggaatgagatggagttcttgatc
aagtggaagggccagtcacatttgcattgtcagtggaaatcatactctggacttcaaaat
ctaagtggttttaagaaggtcttaaattataccaaaaaagtgatggaggatgtcaggtac
aggaagacagtctcacgtgaggagctcgaagtcaacgatgtaagcaaggaaatggattta
gatttaattaagcaacatagtcaggtcgagagaataatttcagatcgaatttctacagat
agctctggtaacgtgatgcctgagtatttaataaagtggcaaggtctatcttatgctgaa
gcaacatgggagaaggatgttgatattgcatttgctcaagatgctatagatgagtacaag
actcgtgaggctgccatggcgacaatagggaaaatggtggatctccagcgcaagaaggga
aaagcaagtttacgaaagcttgatgaacagcctgattggttgcgtggaggaaaacttcgt
gattatcagcttgagggtttgaattttcttgttaatagctggagaaatgacacgaatgtc
attttagctgatgaaatgggtcttggtaagactgtgcagtcggtgtccatgcttggcttt
ttacagaatactcaacagattcccgggccgtttcttgttattgtaccattgtccacactg
tctaactgggctaaagagtttcggaagtggcttcctgatatgaatgttattgtatatgtt
ggtacacgagcaagtcgtgaggtttgcgagcaatatgaattttacaatgataagaaaggt
ggacgacccataaaagttaataccctactgactacttatgaagtagttctgaaggacaag
gctgttttatgcaagatcaagtggaattatttgatggttgatgaagctcataggttaaaa
aatagagaggcacaattgtacacaactctgtcggaatttggcaccaaaaacaaattgctt
atcactggcactccattgcaaaatagtgtggaagagctttgggctctacttcactttctt
gatcctgataagttcaagagtagggatgattttgtagaaaattacaagaatcttagctca
ttcaatgaaaatgggcttgctaaccttcatatggaattgaggcctcatattctccgaaga
attatcaaggatgtagagaagtcattgcctcctaaaatagaacggatacttagggttgaa
atgtcccctctgcagaagcagtactataagtggattttggaacgcaactttcatgacttg
aataaaggagttcgtgggaatcaggtctcccttttaaatattgtcgtagagttaaagaaa
tgttgcaaccatccattcctatttgaaagcgctgaccatggctatggtggggacatcagc
accacagagagcagtaaactggaaagaattatctggagcagtgggaagctagttattctt
gacaaactttttgtcagattacatgagacaaagcacagagtcctgattttctcacagatg
gttagaatgttggacatactggcagactatatgtcacttagaggtttccaatatcagaga
cttgatggtagcaccaaagctgagttacgtcagcaggctatggatcactttaatgctcct
ggaagtgaggatttctgttttcttctttcaactcgagctggtggtctaggtattaacctt
gcgaccgctgacactgtcataatatttgattcagattggaatccacaaaatgacttacag
gcaatgagtagagctcatagaattggacaacaagaagttgttaacatctatagatttgtt
acaagcaaaagtgtcgaggaagatatcttggagagagctaagaaaaagatggtccttgac
catttggtgatccaaaaattaaatgcagagggcagattggagaagaaagaagcgaaaaaa
gggagttattttgacaaaaatgacctttcagcaatcttaagatttggggcagaggaactt
tttnaagaggacaaaaatgatgaagaaagtaagaaaaggctcctaagtatggacatcgat
gaaatcctagaaagggctgaaaaagttgaagagaaggtagaagctgaagcggatcaagga
agtgaactattgagtgctttcaaggttgccaatttctgtagtgctgaagatgatgggagt
ttttggagtcgatggataaaaccagaagctgtaactcaagctgaggaggctcttgctccc
cgagctgctaggaacaccaagagctatgcagagtctaaccaaccagagagaagtaaaagg
aagaagaaaggatctgaaccccaggagcctcatgagggagtccagaagcgtcgtaaagta
gattattctgttccgtcagcaccaatgattgagggagcagttgctcaagtaggaggttgg
tcttacgggaatttgtcgaagagagatgcattgcgcttttctcgtgcggtaatgaaattt
gggaatgagaggcagataagctccattgttgcagaggttggtggtgcaattgctgcagct
cctcctgaagcacagattgagctctttgatgccttaattgatggctgcagagaggctgta
gttgaaaatctggacccagagggttctgtattggatttttttggcgtccctgcgaaggct
aatgaactactcacccgcattcaagaacttcagctcctagccaagcacattagtcggtat
gcagatccaatggcacagtttcgagctttgtcataccttaagccttcaaattggtctaaa
ggttgtggttggaatcaaattgacgatgcaagactgctactgggaatacactaccatggc
tttgacagttgggaaaagataaggttagatgaatgcctttgccttacaaagaagattgct
cctgctgaacttcaacaccatgagacgtttctaccgcgcgctccaaatttgaaggaccat
gcaagtgcacttctagaaatggagctagcagctattggtggaaagggaacaaatgctaaa
gcccgtcgtaagtcttcaaagaaggtgaaagaaaataattcaaacatctcgatgcctcgg
agggagaagagaagaaattttaattctcctattgttgtccaaactaaagacagaccaaag
aaaacccggaaacttgaacctttagtgaaagaggagggtgaaatgtcagacaatgaggaa
gtatatgagcagtttaaggaagtgaaatggatggagtggtgtgaagatgtcatggttgat
gaaattagaactctgaatcatcttcataagttgcagaccaccagtgccaatcttccaaaa
gaaaaggtattaccaaaaattcggaattatttacagcttattggatggaggatagaccaa
attgttgcagatcatgaagaggaactttataggcaagataggatgaccacacgattatgg
aagtatgtctccacattttcaaatctctctggggagaggcttcaacagatctattccaaa
ctcaaacaagagcgggaagaggaggtaggagtgnctaatcatttcatgcggcaaagaggg
tacaagaccacctatcaaatgacagaaccatttcgtaggggtcgtgatactgggaatttc
gaagcttggaaacaaagaagaatggaaactgatatccattcttctgttcagcctctgcct
ccaggacctttgagtaacgggactcatttatctgatccaaactcactaaggattcttgga
gcggcaccatctgacagtagaagtttaggtagtcgaatgcgtcaatctaattttccccct
cgacaaaacttctcgtcaggaatcgattag
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integrated database retrieval system
