Tripterygium wilfordii (thunder duke vine): 120008993
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Entry
120008993 CDS
T07256
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120008993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
120008993
Spliceosome [BR:
twl03041
]
Complex A
U1 snRNP components
U1 related factors
120008993
Complex B
120008993
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Crust_neurohorm
Motif
Other DBs
NCBI-GeneID:
120008993
NCBI-ProteinID:
XP_038715338
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Position
11:complement(951044..964408)
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AA seq
999 aa
AA seq
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MANSSQSSGAQFRPVFPAPPAGQQFWPVGQGMPFSNVGMPAVPSQPLQFSQPSQQLPSRP
GQPGHALPSSQGIPMQYLQQNRPFSSAPPQSQQTGPPLGNHMPGLGPTGVPLSSSYTFAP
SYGQPQNHVSSSSQFQPISQMHAPSVAAAGQPWLPLANHSASHAAPPQLTAQSSASLSEP
ALDSSGLSQQSSSDWQEHTSADGRRYYYNKKTKESSWEKPLELMTPLERADASTVWKEFT
TAEGRKYYYNKVTKQSKWTIPEELKLAREQAEQVTSQGAQSDMVTTSHAPAAVAVPVGET
STAGISSATSPVAVTSVGAVANPSVAVATGSTTPEPYSTATSVAAVQTPEATLIPLSTGV
SSALVNADTTPVSGFDKTSSQDATNSLDGSLTQDIEFREPALIEEFYSQEAKKVVVVAEQ
INATPVDDKTSDDEPLVYANKQEAKNAFKALLESANVQSDWNWEQTMREIINDKRYAALK
TLGERKQAFNEYLGQKKKMEAEERRMRQKKAREEFTKMLEECKELTSSMKWSKAVSLFEN
DERFKAVERVRDREDLYENYLVELERKEKENAAEDHRRNVAEYREFLESCDFIKVSSQWR
KVLDRLEDDERCLRLEKIDRLMIFQDYIRDLEKEEEEQKKIQKDKLRRIERKNRDAFRSL
MEEHVASGTLTAKTRWHEYCLKVRDLPQYQAVASNTSGSTPKELFEEVTEDLDKQFHDDK
TRIKDSMKSGKATLLSSWSFEDFKTAIMEDVGLPAISDNNLKLVYEDLLERAREKEEKEA
KKRQRLADEFTNLLHSYKEITASSIWEECVSLFEESQEYRSIGEESFRREIFEKYISHLQ
EKAKEKERKREEDKARKEKEKEEKEKRKEKERKEKEHEREKVKERTKRDETDSENVDVVD
DYGHKEDKKREKDKDRKHRKRHQSATDDVSSDRDEREDSKRSRRHGSDRKKSRKHAYTPE
SDSESRHKRHKKDHRDGSRRNGGHDELEDGELGEDGEIH
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggccaacagctctcagtcctctggagcacagtttcggccagtgtttccagcaccacca
gctggccagcagttttggccggttggacaaggcatgcctttctcaaatgtcgggatgcca
gctgttccgagtcagccgttgcagttttctcaaccaagtcagcaattaccgtcgcgccca
ggtcagcctggccatgcactaccttcgtcacagggtataccgatgcagtatcttcaacaa
aataggccgttttcttcagctcctccacagtcacagcaaactggtcccccattaggcaat
cacatgcctggcttaggtcctactggggtgcctctttcttcatcgtatacgtttgctcca
tcttatggtcagccacaaaatcatgttagttcatcatcccagttccaaccaatatctcaa
atgcatgcaccttctgtggctgctgcgggacaaccttggttgcctctggcgaaccatagc
gcatcgcatgctgcaccaccacagcttactgcgcaatcttcggcgtctttgtcagaacca
gcattagattcttctggcctttctcaacaatcctcatcggattggcaagagcatacatct
gctgatggaagaagatattattacaataagaaaacaaaagaatctagttgggagaagcct
ttggaattgatgacaccattggagagagctgatgcatcgacagtttggaaagagtttaca
actgcagagggaagaaagtattattacaacaaagtcacaaagcagtctaaatggacaatt
cctgaggaactgaagttagctcgtgaacaggctgaacaagtcactagccagggagcacaa
tcagatatggttacaacttctcatgccccagctgctgtggctgttcctgttggtgaaaca
tctactgcaggaatcagctcagccactagcccagttgcagttacatctgttggggcagtt
gctaatccttctgtggcggtagctactggatcaaccactccagagccatactccactgca
acgagtgttgcagcagttcaaacccctgaggcaactttgattcctttatccactggtgtt
tcttctgctttggtgaatgccgatacaacaccagtgagtggctttgataaaacatcatct
caagatgctacaaattctttggatggatctttgactcaggatattgagtttagggagcca
gctttaatcgaggagttttactctcaggaagccaaaaaggttgtagtggttgccgaacaa
atcaatgcgactcctgtggatgataaaacatctgatgatgaacctctagtatatgccaat
aaacaggaggcgaaaaatgcattcaaagcactactggaatctgcaaatgttcagtctgat
tggaactgggagcagacaatgcgggagatcattaatgataagagatatgcagctctaaaa
acacttggtgagcgaaaacaggcattcaatgagtatttgggtcaaaagaaaaagatggag
gctgaggaaaggcgtatgaggcagaaaaaagctcgtgaagaattcacaaagatgcttgaa
gagtgcaaggagctcacatcatcaatgaaatggagcaaagctgtaagtttgtttgaaaat
gatgagcgattcaaggcagttgaaagagtgagagacagggaggatctttatgagaactac
ttggtagaacttgagaggaaggaaaaggaaaatgctgcagaagaccataggcgtaatgta
gcagaatacagagagtttttggaatcttgtgactttattaaggtgagtagccaatggaga
aaagtcctagatcgcttggaggatgatgaaaggtgtttgcgtcttgagaaaattgaccgt
ttgatgattttccaggattatattcgggatctggagaaggaagaagaggaacaaaaaaag
atacagaaggataaactgaggcggattgagcgcaaaaatcgagatgctttccgcagttta
atggaagaacatgttgctagtggcactcttacggctaaaactcgctggcatgaatattgt
ttgaaggttagggatttacctcagtatcaggctgttgcatcaaacacctcaggctcaaca
ccaaaagagttgtttgaggaagttactgaagacttagataaacagtttcatgatgacaaa
actcgtataaaagattcaatgaagtcagggaaggctaccttgttgtcctcgtggtcattt
gaagatttcaaaactgctattatggaggatgttggtttaccggcaatatcagataataac
ttaaagcttgtatatgaggatctacttgagagagcgagggagaaggaagagaaagaagct
aaaaaacgtcaacgccttgctgatgaattcactaatttattgcactcatataaggaaatt
actgcatcttctatttgggaggagtgtgtgtcactttttgaagagagccaagaatacaga
tcaattggggaagagagctttaggagagagatttttgaaaaatacatttcacacctacag
gagaaggctaaagagaaggaacgcaaacgggaggaggacaaggctagaaaagagaaagag
aaagaggagaaggaaaaacggaaagagaaagaaagaaaggagaaagaacatgaaagagaa
aaggtgaaggaacgtacaaaaagggatgagacagacagtgagaacgttgatgtggtggat
gattatggccataaagaagacaaaaagagggaaaaggacaaagataggaaacaccggaaa
cgacatcaaagtgctactgatgatgtgagttctgatagggatgagcgagaagattctaaa
agatcacgcagacatggcagtgaccgtaagaaatcaagaaagcatgcatacacacctgaa
tcagatagcgaaagccgtcataaaaggcacaaaaaggatcaccgggatggttcccgtaga
aatgggggtcatgatgagctagaagatggggagcttggcgaggatggtgaaatccactag
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