Tripterygium wilfordii (thunder duke vine): 120009185
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Entry
120009185 CDS
T07256
Name
(RefSeq) rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120009185
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
120009185
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
EMC7_beta-sandw
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
120009185
NCBI-ProteinID:
XP_038715582
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Position
11:1384804..1392095
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AA seq
614 aa
AA seq
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MDNGIVEVTLANPGGFVTGIKYNGIDNLLELENQESNRGYWDVVGTAGLESVKGSLFKVI
VQDEGRVEVSFIRSWDQSLQGRLVPVSIDLRYVMLKDSSGFYSYAIFDHLKQWPSFWISQ
IRLVFKPRQDKFHYMAISDKMQRYMPTAADRDPPRGQALDYKEAVLLVNPVDPQFKGEVD
DKYEYSVESKDIKVHGWVVTDTPSVGFWQITPSNEFRSGGPNKQELTSHVGPTCLTDFLS
SHYVGGEYITLQVAANEPWNKVYGPVFIYLNSGPAGGTPSQLWEDAGRQMQTEVQNWPYG
FPASEDFPKLNQRGSIDGRLQVRDRYARNVEVPASNAYVGLALPGAAGSWQTESKGYQFW
TTTDENGDFSIKSVRPGNYNLYAWVPGFIGDYKYDTVINITPGSNVQVNNLVYEPLRDGP
TLWEIGIPDRSVEEFYIPDPGPNYINKLYVNDAADRFRQYGLWEKYAELYPRGDMVFTVG
TSDYRKDWFYAQVTRKISANKFQGTTWQIKFKLAQVDDRKTYKLRVAIAGAELSHLQVRV
NNPNGTPVFSSGLFGRDNSIARHGIHGLYFLFNIDVPGAQLVVGDNTIFLTQPSSNGAFQ
GIMYDYIRLEGPPL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggataacggcattgttgaggtcaccttggcaaatccaggagggtttgttactggaata
aaatacaatggcattgacaatttgcttgaacttgaaaatcaagaatctaatagagggtac
tgggacgtggtaggaactgcaggactggagagcgtcaaagggtcattgttcaaggtgatc
gtgcaagacgagggacgagtagaagtctccttcatcagaagctgggatcaatcccttcag
ggcaggcttgttcctgtgagcattgatttaaggtatgttatgctcaaggattcatcgggg
ttctactcctacgccattttcgaccacctgaagcaatggccttctttctggatttcacaa
atcaggcttgtattcaagcccagacaggacaaatttcactatatggcaatatcagacaaa
atgcagcggtacatgccaactgctgctgaccgagacccaccgagaggccaggccctcgac
tataaagaagcagtactacttgtgaatcctgtggatcctcaatttaaaggagaggtggat
gataagtatgaatattcagtggaaagcaaagacattaaggtgcatgggtgggtagtcaca
gacacgccatcagttgggttctggcaaattacacccagcaatgagttcagatcaggtgga
cccaacaaacaagaacttacctcccatgttggccctacctgcctcacagactttctgagc
agtcactatgtgggaggagagtatataacactacaagttgcggccaacgaaccatggaat
aaagtatatggtcctgtttttatatatcttaattctggacctgctggaggtaccccatct
cagctttgggaggatgctggcagacagatgcaaactgaagttcaaaactggccctacggt
tttccagcttcagaagattttccaaaattaaatcaaagaggcagcatcgacggtagatta
caagttcgagatagatatgcaagaaatgtagaagtacctgctagcaatgcttatgtgggg
ttggcacttcctggagctgctggttcttggcaaacagagagcaagggctatcaattctgg
acaacaacagatgagaacggagacttctccattaagagtgtaaggcctggaaactataat
ctatatgcatgggtacctggcttcattggagattacaagtacgatactgtcatcaacata
actccaggctcaaatgtacaagttaataatcttgtatatgaacctttgagggatggtccc
acattgtgggagataggcatccctgatcgatctgtggaagagttttacattcctgatcct
ggacccaattatatcaacaaactttatgtcaatgatgctgctgacaggttcagacaatat
ggattatgggaaaaatatgcagagttatatcctcgaggagatatggtcttcactgttggc
actagtgactacagaaaagattggttctacgctcaagttaccaggaagatctctgctaac
aaatttcaaggaactacatggcaaatcaagttcaaacttgcccaagtagatgatagaaaa
acctacaaactgagagtggcaattgcaggtgcggaattatctcatttgcaggttcgggta
aacaatccgaatggaacacccgtgttttcaagtggactatttgggagggacaattcgatc
gcaagacatgggattcatggactttacttcctgttcaacattgatgtccctggtgctcag
cttgtggtaggggataataccatttttctgacacaaccaagcagcaatggtgctttccaa
gggatcatgtatgactatattcgtttagaaggacctccattgtag
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