Tripterygium wilfordii (thunder duke vine): 120009254
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Entry
120009254 CDS
T07256
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
twl01002
]
120009254
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
120009254
Enzymes [BR:
twl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120009254
Peptidases and inhibitors [BR:
twl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120009254
Ubiquitin system [BR:
twl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120009254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
120009254
NCBI-ProteinID:
XP_038715680
LinkDB
All DBs
Position
11:complement(1648548..1657773)
Genome browser
AA seq
1149 aa
AA seq
DB search
MHVAGDLGFSSLVLVFCLVFPVIGLVIRRKWRFASAKQEEIKRLLILASEEARRAEEEAF
DSYGVVPPSSTNYQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKEECHLPDATCG
INNEGNDGDQKVTSDQHEIYGERFEMEYIECSKQIENDYGESTFSGSSYSPEVLRSKDED
INVEFDAVGRATDLTSESSSTSFSGFSATSSRNESSDDLSVSESVSSNEIEEATGYLSAD
NDLDMLGMTSNAIKVDRAELLSSNFTNLVDSVDSFNKLGKLNNYKPSPSNRGSQHVSSKS
SVLSQNPMPENSNARPCKISSGFWGRALDTNGSPSQARSDSAVSNSTRAGRGVLSDSESL
ARLSFNFLADNLHLQTEYSVEKDVGTGDVLPASRPRAINKHADTAANSENAGVDDPKVMN
ISSSNCGRSKDAVNDFSHDSYEPKSREVESVLLSSHKHRSSTAVEDSFTKDTSKVSRVQS
AVSARTNRHVNDTAITSHLAKSGDVERLSSVSQANLASTCDGHSLHSVKSGNFNGVQTVA
SSQVTSFPNSRPGLKTSMLKVVDQFTGSKLSKHHSLGNGGEGAERYDKGFFPYELFVKLY
TWNKIELRPCGLVNCGNSCYANAVLQCLAFTPPLTAYFLQGLHSNACGKKGWCFTCEFES
IILKVKEGKSPLSPIGILSKLQNFGRQLGNGREEDAHEFLRYAIDAMQSVCLLEAGVSTT
GSPEEETTLIGLTFGGYLRSKIKCARCQVKSERHERMMDLTVEIEGDIQTLEEALRRFTA
TEILDGDNKYQCSRCKSYEKAKKKLTILEAPNVLTIALKRFQSGKFGKLNKAIRFPEILD
LAPYMSGTSDKSPSYRLFGVVVHLDIMNASFSGHYVCYIKTVQNKWFKIDDSTVTPVELE
RVLTKGAYMLLYARCSPRAPKLIRNRMTPSDAKIKTIPSMVNGKNASAKSSPRDNLANYE
SFYTKFHHIQRILGEDSSSDNYSFTSSNSDEGSCSTDSNRGSTSTDDFSDFIFGDSGRVW
SNSWKIYSDSDTSSSSSLSSSSPSYLRHPQLADPEHCAPGPPETSGSRAYRADSAMKHDG
WDRRPNGSGRLVDLEGKGRRFFLHSDSTKQCRKSASTGSSSFRERDSERLGRNTPFDDVK
SGVFRERTS
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcgccggggatctagggttttcgagcctagtccttgtgttctgtctggttttt
ccggtgatcggcctcgttattcgccgtaaatggcggtttgcctcggctaagcaggaggag
atcaagagacttctgattttggcatcggaggaggccagaagagccgaggaggaggccttt
gattcgtacggcgtcgtcccaccttcttctacgaattatcagtgtgctgtttgcttttcc
cccaccactacgcggtgtgctcgctgtaaagctgttcgatactgttctggtaagtgtcaa
attgttcattggcgacaaggtcacaaggaagagtgtcatcttcctgacgctacttgtggg
attaacaatgagggaaatgatggtgatcagaaagttacttcagaccaacatgagatatat
ggtgaaagatttgagatggaatacattgaatgctcaaaacaaattgaaaatgattatggg
gagtccacattttctggttcaagttactctcctgaagtgttacgtagcaaggatgaggac
attaatgttgagtttgatgctgttggcagagcaacagatttgacgtctgaatcatcttct
acatcattttctggattttctgctacatctagccgcaatgaatcatcagatgatctttct
gttagtgaaagtgttagctcaaatgaaattgaggaagcaactggatatctgtctgctgat
aatgacctggacatgcttgggatgacttctaatgcaatcaaggtggatcgggctgagctt
ttatcttcaaatttcaccaatttagttgactctgtagatagttttaataaactaggtaaa
ttaaataattataaacctagccccagcaatagaggcagccagcatgtctcaagtaagtcc
tcagttttgagtcaaaatcccatgcctgagaattcaaatgccaggccctgtaagatatct
tctggtttctggggcagagcgctagacacaaatgggtctccaagtcaggctcgctctgat
tctgctgtatccaattccaccagggctggccgaggagttttatctgattctgagtccttg
gcacgtttgtcattcaactttctggcagataatctacatttgcagacagaatactctgtg
gagaaagatgttggaactggtgatgttcttccagcctcccggccccgggcaatcaataag
catgcagatactgcagccaattctgaaaatgctggtgttgatgacccaaaggtcatgaat
atctcgtcctcaaattgtggtagatctaaggatgcagtcaatgacttcagccatgattca
tatgagcccaagtcaagagaagttgaatctgtattgttgtcatctcataaacatcgatct
tctactgctgtggaagattcgtttacaaaggatacttcaaaagttagtagagtgcaatct
gctgtctctgcaaggacaaatcgccatgttaatgacactgctattacttcacatcttgct
aagtcaggagatgtagaacgattaagcagtgtttctcaagctaatttagcttctacttgc
gatgggcattctcttcacagtgtgaaatctggaaacttcaatggtgttcagactgttgca
tcttctcaggttacaagttttccaaattctaggcctggtttaaaaacatctatgctgaag
gttgtggatcagtttacaggatctaaattgtcaaaacatcattctttagggaatgggggt
gaaggcgctgaaagatatgacaaggggttcttcccatatgaattatttgtgaagctttat
acttggaacaagatagaactgcgaccatgtggcctcgtcaactgtggcaacagctgttat
gccaatgctgtgcttcagtgtttggcattcactcctcctttgactgcttattttctgcaa
ggactccattctaatgcctgtggaaagaaagggtggtgcttcacttgtgagtttgaaagt
ataatattgaaggtaaaagaagggaaatccccattgtctccaataggtattctatccaaa
ctacagaactttggaaggcagcttggtaatggcagagaggaagatgcacatgaatttctt
aggtatgccattgatgctatgcaatctgtatgcctcttggaagctggggtaagtactaca
ggatctccagaagaagaaacaactcttataggccttacattcggaggttacttgcggtcg
aagataaaatgtgcaagatgccaagttaagtcggagcgacatgaaaggatgatggatctt
acagttgaaatagagggggatatacaaaccctagaagaggcacttcgacgatttacagct
actgagattttggatggcgataacaaataccaatgcagcagatgtaaatcctatgagaag
gccaaaaagaagttgacgatactagaggctcctaatgttcttacgatagccttgaagcga
tttcagtcaggtaaatttggaaagcttaacaaggcaatccgattcccagagatacttgac
ttggcaccatatatgagtgggacaagtgataaatcaccttcatacaggctttttggagtg
gtggttcacctggatatcatgaatgcttcattttctgggcactacgtgtgctacatcaaa
actgttcaaaacaaatggttcaagattgatgacagtactgtgacacctgtggaactcgag
agagtgttaacaaaaggggcatacatgctactttatgcaaggtgctcgccgagggcccca
aaattgattaggaacaggatgacaccttctgatgcgaagatcaaaaccattccttccatg
gtgaatggaaaaaatgctagtgcaaagtcttctcctcgagataatctagccaactatgaa
tctttctatacgaagttccaccacatacaaaggattttaggagaggactcttcaagtgac
aattattctttcaccagcagcaactctgatgagggttcctgcagtactgatagcaaccgg
ggttctaccagcacggatgacttttccgacttcatatttggtgattcaggacgtgtttgg
agcaactcttggaagatttattctgattctgacacatcatcctcgtcttccttgtcctct
tcatctccatcatacttgagacatccacaattagctgatcctgaacactgtgctccagga
cccccagaaacaagcgggtctcgagcatatcgtgcagattcagccatgaagcatgatggt
tgggatagacgacctaatggtagtggcaggctggtggatttggaaggcaagggaaggagg
ttttttttgcattctgactctactaaacagtgtagaaaatcagccagtactggtagcagt
agctttagggagagagactcggagagattaggacggaatacccctttcgatgatgtaaag
tctggtgtatttagagaaagaacaagttaa
DBGET
integrated database retrieval system
