Tripterygium wilfordii (thunder duke vine): 120009426
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Entry
120009426 CDS
T07256
Name
(RefSeq) zinc finger CCCH domain-containing protein 41-like
KO
K13192
RNA-binding protein 26
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
twl01009
]
120009426
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120009426
03041 Spliceosome [BR:
twl03041
]
120009426
Protein phosphatases and associated proteins [BR:
twl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120009426
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
120009426
Spliceosome [BR:
twl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120009426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
PHM7_cyt
RRM_Nup35
zf_CCCH_4
SAP130_C
RNA_bind
Motif
Other DBs
NCBI-GeneID:
120009426
NCBI-ProteinID:
XP_038715953
LinkDB
All DBs
Position
11:4145255..4155665
Genome browser
AA seq
939 aa
AA seq
DB search
MELKVSSAKSRGLTPSDCASDPEEKEVSDEEDDDRNHKHRRQDARSQYLERDTAESVYAR
PYKKRDPKLFENGHPFRENESQASQSWRNYSNAPLEKDFPMKFEKRRPGLVSMPRGPLDL
NQRIRLNQIFPCDAGLGRGRGRGRDPGSWNQHDSRFSSVDIASQMLQQGPITPSLFAGRG
LPNAFGLLPGLPNGGLDTFHSIGLQGTVRAPLNSSLNIGIPRHRCRDFEERGFCLRGDMC
PMEHGVNHIVIKDVQSLSQFNLPVSLSSAQLAGAAAGPGTLSSIGNPSSTFMNSKGHGKG
TKLGMADDVLGLNGGFSGSFSAGGADSYDPDQPLWNSNYPKTSTSLLVPHSPKNDENELL
LNADASVHPHVRLHDIADSECPERSAATVIGSEGTSSSVWGRIGSSKGGLDIKENCNLTI
SSSNYIENDSKKDQDVIANVKGTSRHGKSFNPEDVGRKFMVSSPGTQIDSFRNIRRPSQK
AVRTLFVNGIPQKTNKKEALLSHFQKFGRVIDTYIPSNSERAFVQFSKREEAEAALKAPD
AVMGNRFIKLWWANRDNIPEDGMSGGSDVLSLAVTAAPVPPNPFIANKGKDGFQSVPKGS
TVHASETSLPASDQPKPLVTNSPKVTPPLQKKLESLEHLKEELRKKQELLDQKRNDFRRQ
LDRLAKQATGVKFDVVTEQATKRQKVGIVDDVAKATAPRPSDPSAAATSPLVEMADKIKN
KMENVVSSCPEKSMAILEQESTNSKHQILPVAAARTPFLLNRYKLDNRPTAFRVIPPLPS
AFANVAVLKEHFSSYGHLSMVELEDVEALDSSDSSGTNKNCSACITFKTRHSAELAYLNG
KCWQGHTMQFMWLTSCNSSRDPTGREKSPLAPKFHADYNSNPAEKLVSTVSLEATASGNE
ETDNSGGRDGVPTMASQEVSQPSPKAISSGEESPKGDDC
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggagctcaaagtttcatctgcaaagtccaggggtctcaccccatctgactgtgccagt
gatcctgaggaaaaggaagtcagtgatgaggaggatgatgatcgtaatcataagcatcgt
agacaggacgctcggtcgcagtatttggagagagatactgcagaatcagtttatgcaagg
ccgtataagaagcgtgaccctaaactttttgaaaatgggcatcctttccgagaaaatgaa
tcccaagcaagtcaaagctggagaaactatagcaatgctccgctagagaaagattttcct
atgaagtttgaaaaaaggcgtcctggcttagtgtcaatgccacgaggacctttggatctg
aatcaaaggatcagattgaaccaaatatttccttgtgatgctggtctaggaaggggaagg
ggaagaggaagggaccctggctcttggaatcaacatgattcaaggttcagctctgtggat
atcgcttctcaaatgcttcagcaggggcccattactcctagcctttttgcagggagaggg
ttgccaaatgcatttggattattgccagggctgccaaatggtggcctggatacatttcac
tccattggtttgcaaggaactgtcagagcaccattaaattcttcactaaatattggtata
cctcgccatcgatgtagggattttgaggagcgtggattttgtctgagaggagacatgtgc
ccaatggagcatggtgttaaccacattgtcattaaagatgttcagagcctttcgcagttt
aacctaccagtttcactttcaagtgctcaactagcaggagcagcggctggaccaggaact
ctatcttctattggtaatccttcaagtacttttatgaatagcaaaggccatggaaagggc
accaaacttggaatggctgatgatgtcttgggcttgaatggtggattttctggttctttt
agtgctggtggagcagactcatacgatccagaccaaccattgtggaatagtaactacccc
aaaacctctacttctctcttggtgccacattcacccaagaatgatgaaaatgaattgtta
ttgaatgctgatgcttcagttcatcctcatgtcagattacatgatattgctgatagtgaa
tgcccagaaagaagtgcagctactgtcattggttcagagggtacaagttcgtcagtttgg
ggtagaattggtagttcgaaaggaggattagatataaaagaaaattgtaatttaactata
agttcctcaaattatattgagaatgatagtaagaaagatcaagatgtaatagccaatgtc
aaaggcacttctcgtcatggaaagtcatttaatcctgaggatgttggtagaaaattcatg
gtttcatctccagggacacagattgactcatttcgtaatattcgtagaccgtctcagaag
gctgtgcgtactctatttgtcaatggcattcctcagaaaaccaacaagaaggaggctctg
ctttctcattttcaaaaatttggaagagttattgacacatatattccatcaaacagtgaa
cgagcttttgttcagttttcaaaaagggaagaggcggaagctgcactcaaggcacctgat
gctgtaatgggtaaccgctttattaagctatggtgggctaatcgtgacaacattcctgaa
gatggcatgagtggtggaagtgatgtattatcccttgcagtcacagctgctcctgtacca
cccaacccattcatcgctaacaaaggaaaagatggttttcaatctgtgccaaagggtagt
acagttcatgcttcagaaacttctctgcctgcttctgatcaacctaagcctttggtaaca
aacagtcccaaggttacacctcctttacagaagaagctagagagcttggagcacttgaag
gaggaacttcgcaagaagcaagaactgctggaccagaagcgtaacgacttccggcgccag
ttggacagacttgctaaacaggctacaggagtcaaatttgatgtagtgactgaacaagct
actaagagacaaaaagtgggaattgttgatgacgttgcaaaagctactgctccaaggccg
tctgatcccagtgctgcggcgacttctccacttgttgagatggcggataaaattaagaac
aaaatggagaatgttgtttcctcttgtcctgagaaaagtatggccatacttgagcaagag
tccacaaactcaaaacaccagattcttccagttgcagctgctaggactccttttctgttg
aatagatacaagttggacaaccggcccactgcatttagagttattccacccttgccttct
gcgtttgctaatgttgctgtcttgaaggaacacttctcatcatacggtcatctttctatg
gtggaacttgaagatgtggaagccttggacagtagtgacagttcagggacaaataagaat
tgctcagcttgtataacattcaagacacgccattcagctgagttagcatatctaaatggt
aaatgctggcaaggacacacaatgcaattcatgtggctaacatcttgtaattctagcaga
gaccctactggcagagaaaaatctcctttggcccccaagtttcatgcagattataattct
aatccagcagaaaagctagtgtccacagtttccctggaagccactgcatcaggaaatgaa
gaaactgacaattcaggtggaagagatggtgtccccaccatggcgtcacaggaagtatcc
cagcctagtccaaaggcaatttccagtggtgaggagtcccctaaaggcgatgactgttga
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