Tripterygium wilfordii (thunder duke vine): 120010812
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Entry
120010812 CDS
T07256
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
twl03036
]
120010812
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
120010812
REST complex
120010812
Heterochromatin formation proteins
Other heterochromatin formation proteins
120010812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Lzipper-MIP1
Motif
Other DBs
NCBI-GeneID:
120010812
NCBI-ProteinID:
XP_038717613
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All DBs
Position
12:10612359..10625409
Genome browser
AA seq
1394 aa
AA seq
DB search
MKRMRDDVYPGSQVKRPFGSSRGESSYGQPQIPGGGGGIGGGGGGDPSQKLTTNDALTYL
KEVKDMFQDQREKYDTFLEVMKDFKAQRTDTTGVIARVKELFKGHNNLIFGFNTFLPRGY
EITLDEDGAPPKKTVEFEEAISFVNKIKKRFQSDDYVYKSFLDILNMYRKEHKDISEVDS
EVAALFEDHPDFLEEFRRFLPDSSVTHVSQIPYGRSSIQHYNDRNFATPSLRHLHMDKHH
QRDRIITSHADRDRSADCPELDKEKSMLKVHKEQKKHAEKESRDRRNYDYDDREAKNNRD
LEHIADRKKSAQKVEGYGPNSNFASFDERDTSKNMYSQAFAFCEKVKERLHSLDDYQAFL
RCLSIYSQGIIKRNDLLNLVTDLLGKYPDLMEEFKDFLERCEDLDGFLAGVMSKKSLCTD
GHVSRSLRADEKEKEHKRELESAKEKDRGREKYMAKSIQELDLSNCERCTPSYRLLPEDY
PIAMASHRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLES
VSSTAKCAEELLNKMNEKYPNLGSPIQMEDYFTALNLRCIERLYGDHGLDVMDILRKNPS
LALPVILTRLKQKQDEWTRCRSDFNKVWADIYAKNHYKSLDHRSFYFKQQDSKNLTGKSL
VTEIKELKEKLQKEEDVILAFAAGTKQHLVPHFEYEYSDVSIHEELHKLVQYSCKEVCST
KEQSNKVMKFWTTFLEPMLGIPSRPYGTTSSADVGNASNIATKDTASSIEGGDSSPAPDA
MTSSSIKPAAHVDESSLLGLAKCSSRRLANGDTMAKEDSMIRVDRVWKSDLTGDNQQLGR
EAKNTEMTGRISGYSIQIASAQVAGDSSASLTENSHRRTSDEVTAGHVAIPSLHGDASIE
DQKLKARADIAPSSKGEDAAKPILPPNGVPTNDIKVNRYHEDAAGPSKIEKEEGELSPNG
DFEEDNFAVYENTGVQVMPKGKELNGSRQQKSGKEEELFCQGTGGNYADADDDDSENASE
AGDDVSGSESADDECSREEHGEEEDVEHVEVDGKAESDGEAEGMADTQFVGGGDSTALPS
ECFLLSVKPIAKHVPSGLFNEERKDSRVLYGNDDFYVLFRLHQILYERILSAKKNSTGVE
MKWRNTKDTDSPGPYARFMSVLYNLLDGSVDNAKFEDECRAIIGNQSYVLFTLDKLIYKL
VKQLQTVATDEMDYKLLQLCEYERSRLPGKIIDSVYYENARSLLQEENIFRFECSTAPSR
LSIQLMDNATEKPEVFAVSMDPDFGAYLHNDFLSVFPGKKEPHGIIMRRNMRKYVGVDEY
SATCMAMEGSKIFNGLECKIACSSCKISYVLDTEDFFFRLKSKRKKLSRDGSFYHDQTRS
RVQRFVKFLSASAS
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaatgagagatgatgtttaccctggctctcaagttaagcggccgtttggttct
tctcgaggagaatcaagctatgggcaacctcaaattcccgggggaggaggaggaataggt
ggaggaggtggaggtgacccttctcagaaactcaccactaatgatgctctaacatatcta
aaggaagtaaaggacatgtttcaagaccagagggaaaagtatgacacatttttggaggtg
atgaaagatttcaaggctcaaagaactgatactactggtgtgattgcaagagtgaaggaa
ttattcaaggggcataacaacctaatttttggatttaacactttcttgccaagaggttat
gaaataacccttgatgaagatggggctccaccaaagaaaactgttgagtttgaagaagct
atcagctttgttaataagataaagaaacgtttccaaagtgatgactatgtttacaaatcg
ttcttagacattttaaatatgtatcgaaaggagcacaaggacatcagtgaggtcgacagt
gaggttgctgctctgtttgaggaccatccagattttcttgaagagtttagaagattctta
cctgattcttctgtaactcatgtgagtcaaattccatatggtcgaagttctatccagcac
tacaatgaccggaactttgctacaccctcattgcgccacttgcatatggacaagcatcat
cagagggatagaattattacttcccatgcggaccgtgatcgtagtgctgattgccctgag
ctggacaaggagaaatcaatgttgaaagtgcacaaagaacaaaagaagcatgctgaaaaa
gagagtagggaccggagaaattatgattatgatgatagagaagcaaagaacaatagggac
ttggaacacattgctgacagaaaaaaatctgcccagaaggttgaaggttatggaccaaat
tcaaactttgcttcttttgatgaaagagacacttcaaagaatatgtacagccaggcattc
gcattttgtgagaaagttaaggagaggttacacagtttggatgactaccaagcattcctg
agatgcctcagtatttatagccaaggaattattaaaaggaatgatttgctaaatttggtg
actgatttacttgggaagtatcccgatcttatggaggagttcaaggacttcctggagcgt
tgtgaggatctagatggtttccttgctggcgttatgagtaaaaaatcactatgtactgat
ggacatgtatcgagatcattgagggctgatgaaaaagaaaaagagcacaagcgtgaactt
gaaagtgccaaagaaaaggatagaggcagagagaaatatatggcaaaatcaattcaagag
cttgacctttctaattgtgaacgctgtactccaagttatcggcttctgccagaggattat
ccaatagctatggctagccatagatctgagcttggtgctcaagtattgaacgatcactgg
gtttcggtgacttctggaagtgaggattactcttttaaacacatgcgcagaaatcagtat
gaggaaagcttatttagatgtgaagatgataggtttgagctggacatgctgttagagtct
gtgagctctactgccaagtgtgccgaggaattgttgaacaagatgaatgaaaaataccct
aatctgggctccccaatccagatggaggactactttactgctttaaatcttaggtgcatc
gaacgtttatatggtgaccatggtcttgatgtgatggacatattgcggaagaacccaagt
cttgccctacctgttattttaactcgtctgaagcaaaagcaagacgagtggacaaggtgt
cgctcagattttaataaggtctgggctgacatatatgctaagaaccattacaaatcactt
gatcatcgcagcttctattttaaacaacaggattcaaagaacttgactgggaaatctttg
gtgactgagatcaaggagttgaaagagaagctgcagaaagaggaggatgttattcttgct
tttgctgctggaaccaaacaacatttggttccacattttgaatatgaatactctgatgtc
agcattcatgaagagttgcataaacttgttcaatattcatgtaaagaggtttgctcaact
aaggaacagtcgaacaaagttatgaaattttggactaccttcttagagcccatgctgggt
attccttcacggccttatgggacaacgagttctgcagatgttggaaacgctagcaatatt
gctacaaaggatactgcatctagcatagaaggaggtgatagtagtcctgctccagatgct
atgacaagtagttccataaaaccagctgctcatgtggatgaaagctctttattgggacta
gcaaaatgttccagcaggaggttggcaaatggagatactatggctaaagaagatagtatg
attcgcgtagatcgtgtatggaaaagtgatctgacaggtgataatcaacagctaggaaga
gaggcaaagaatacagagatgactggcagaatttctggatatagcatacaaattgcctct
gctcaagtagctggagattccagtgcgtcacttacagaaaacagtcatcgaagaaccagc
gacgaggtgacagcagggcatgttgcgattccatctctacacggtgatgctagcattgag
gaccaaaagctaaaagctagagctgatattgcaccttcatcaaagggtgaagatgctgca
aaaccaatcttacctccaaatggagtgcctacaaacgacattaaagttaatagatatcac
gaagatgctgctgggccctccaaaattgaaaaagaagagggtgagttgtcacctaatggt
gattttgaggaggacaattttgctgtctatgaaaatactggtgtgcaggtaatgcccaag
ggaaaggaacttaatggaagtaggcaacaaaaatcaggaaaggaggaggaattattttgt
cagggtactggaggaaactatgcagacgctgatgatgatgacagtgaaaatgcttccgag
gctggtgatgatgtttcaggcagtgaatctgctgatgatgaatgctctcgagaagagcat
ggggaggaggaagatgttgaacatgttgaagtagatggtaaggctgaaagtgatggtgaa
gctgagggcatggctgatacacagttcgttggaggaggagatagcacggcattgccatca
gaatgttttctgttgtcagtgaagcctattgcaaagcatgtaccatcaggtttatttaat
gaagaaaggaaggattctcgggttctttatggaaatgatgatttctacgtcctctttagg
cttcaccaaattttatatgaaagaattttgtcagcaaaaaaaaattcaacaggtgtcgaa
atgaaatggagaaacacaaaagatactgattctcctggtccatatgcaagatttatgagt
gtgctatacaatttgcttgatggctctgttgacaatgcaaagttcgaggatgaatgtcga
gctattataggaaaccagtcttatgtgttattcacactggacaagttaatatataaattg
gtcaagcagcttcagactgttgcaaccgatgagatggactataagcttcttcagctgtgc
gagtatgagagatcccgactacctggaaagataattgattcagtgtattatgagaatgcc
cgttccctccttcaagaggagaatatatttagatttgaatgttcaactgccccgtcccgt
ttatccatccagttgatggacaatgcaaccgagaagcctgaggtgttcgctgtttccatg
gatcctgattttggggcttatcttcacaacgatttcctgtctgtatttccaggcaaaaag
gagccacatggcattataatgcgaagaaacatgcgcaaatatgttggtgttgatgagtat
tctgctacatgcatggccatggaaggttctaaaattttcaatggccttgagtgtaagata
gcttgcagctcatgcaagatctcctatgttttggacacagaagattttttctttcgtttg
aaaagcaaaagaaaaaaattgtcaagggatggatctttctatcatgatcagactcggtca
agagtacaacgctttgtcaaattcttatcagcctcggcctcatga
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