Tripterygium wilfordii (thunder duke vine): 120010819
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Entry
120010819 CDS
T07256
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120010819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
120010819
03009 Ribosome biogenesis [BR:
twl03009
]
120010819
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120010819
Spliceosome [BR:
twl03041
]
Complex A
U1 snRNP components
U1 related factors
120010819
Complex B
120010819
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
Pre-60S particles
Helicases
120010819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120010819
NCBI-ProteinID:
XP_038717628
LinkDB
All DBs
Position
12:complement(10247050..10254860)
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AA seq
707 aa
AA seq
DB search
MASTAMASIRYAPEDPTLPKPWRGLVDGKTGYIYFWNPETNITQYERPMSSAVPLKPSSF
SVSSSVQVQQSSQGQYRGYIPEKEDDRYNGDKDVGSKFEGGSRGNQGMRGGLTQSHNDAN
GTIAAVHGGSTRGYGSSDGGSSLSVEAYRRRHEITVIGGEVPAPFTSFEATGFPPEILRE
VQNAGFSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFINLKRSRNNPQMGPT
VLVLSPTRELATQIQDEAVKFGKSSRISCTCVYGGAPKGPQLRDLDRGTDIVVATPGRLN
DILEMKRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMYTATWPKEVRKI
AADLLVNPVQVNIGNVDELVANKSITQYIEVLPPMEKHRRLEQILRSQEPGSKIIIFCST
KKMCDQLARNLTRQFGAAAIHGDKSQTDRDYVLSQFRTGRSPVLVATDVAARGLDVKDIR
VVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFSDQDAKHASDLIKVLEGANQQVPSEI
RGMASRGGGMVRARRWASGDGGHGGGSDFGYGGRGSSYSSGRAERGGGRGYGRESRDRYD
RSYFGGNDRGRSRSRSPERFDGAQSKRERSPVRSFHQAMMEGGRSMAQNHLVPPYKSDDA
KDYRNSAKSWSPKKDDGGFVDRPQFGDEEEEGRIEGDGLLPPVEGGM
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcttctactgcaatggcctctattcgatatgctccagaggatcctactcttcccaag
ccatggagaggtctagtagacggtaaaactgggtatatttacttttggaatccagagacc
aatatcactcaatatgagaggcctatgagctcggctgtgccactcaaaccttcctcattt
tctgtaagttcttcagttcaagttcagcaatcttctcaaggacaatacaggggctacatt
cctgaaaaggaagatgataggtataatggagacaaagatgttgggtcaaaatttgaggga
ggttcaaggggtaatcagggtatgaggggcggactaactcaatctcacaatgatgcaaat
gggactatagctgctgtacatggaggatctactagagggtatggatcatcggatggagga
agtagtttatctgtggaggcttatcgtcgtcggcacgaaatcactgttattggaggtgaa
gtgcctgccccttttacgtcttttgaagccactggttttcctcctgagattcttcgagag
gtacagaatgctggcttctctgcccctactccaattcaggcacaatcatggcctgttgct
ttgcaaagtcgagatatagtggccattgctaaaactggctctgggaagactctgggttac
ttaattccaggattcattaatctcaagcgcagccgtaataaccctcagatgggtccaact
gtgttggtgttgtcaccaacgagggagttggcgacccagattcaagatgaagctgtgaag
tttgggaagtcgtcaagaatttcttgcacatgtgtttatggcggagcacctaagggtccc
caattacgtgatctagatagaggaactgatattgtagtcgctactcctggccgcttgaat
gatattctcgagatgaagagagttagccttcatcaagtttcttaccttgtgctggatgag
gctgatcgcatgttggacatgggttttgaacctcagataagaaagattgttaaggaggtg
cctgctcgtcgccaaactcttatgtacacagccacttggccaaaggaagttcggaaaatt
gcagcagatttgcttgtgaatcctgttcaggttaatattgggaatgtcgatgagctcgtg
gctaataagtcgatcacgcagtatatcgaggtactgccacccatggagaaacacagacgg
ctggagcaaatattacggtctcaagaacctgggtcaaagataattattttctgttcaacc
aagaaaatgtgtgatcaactagctcgcaaccttacccgtcaatttggagctgcagccatt
catggagataagtcacagactgatagagattacgtgctgagtcaattccgtactgggaga
tctccagtgcttgttgcaactgatgtcgctgctagaggactggacgtaaaggacatcagg
gttgttgtcaactacgacttccccactggagttgaggactatgttcacaggattgggagg
actgggagggccggtgccactggagtggcttacactttcttcagtgaccaggatgcaaaa
catgcttcagatctcatcaaagttttggaaggggcaaaccagcaagtcccttcagaaatt
cgtggaatggcttctcgcggtggtggcatggtaagggctaggcgttgggcttctggtgat
ggaggccatggtgggggaagtgactttggttatggtggaaggggttcaagttactcttct
ggcagggcagaaagaggtggaggtcgtggatatggccgtgagtcccgcgataggtatgac
cgcagttattttggtggtaatgatagaggccgtagtcgcagtaggagccctgaacggttt
gacggggctcaatccaaacgggaacggtctccagtgcggagtttccaccaggcaatgatg
gaagggggccggtcaatggctcaaaaccatctggtgccaccatacaaaagtgacgatgca
aaggactacagaaattctgcaaaatcatggagtcctaaaaaagatgatgggggatttgtt
gaccggccacagtttggggatgaagaagaggaaggcagaattgaaggtgatggcctctta
cctccagttgagggtggtatgtag
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