Tripterygium wilfordii (thunder duke vine): 120010870
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Entry
120010870 CDS
T07256
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
twl01002
]
120010870
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
120010870
Enzymes [BR:
twl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120010870
Peptidases and inhibitors [BR:
twl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120010870
Ubiquitin system [BR:
twl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120010870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
120010870
NCBI-ProteinID:
XP_038717699
LinkDB
All DBs
Position
12:11721650..11730248
Genome browser
AA seq
1133 aa
AA seq
DB search
MHVAGDLGFSSLVLVFCLVFPVIGLVIRRKWRFASARQEEIKRLLILASTEARRAEEEAF
ASYGVLPPPSTNYQCAVCLSPTTTRCARCKAVRYCSGKCQIVHWRQGHKEECRPPGATCR
INNGGNDGDQKVTSDQHESFGERFEMEYHECSKPIENGYGESAFSGSSYSPEVLRSKDED
IKVEFDAVGIATDLTSESSSTSFSGFSATSSSNESSDDLSVSENVSLNENEGSTGYLSAE
TSHAIKVDQTEFLSSNFTNLVESVDSFNKLGKLNNNKSSSGNRGSPHASNKSSVLSQTPT
SENSNAKPSKISAGFWGRALDTNRSPSQAFSDTAVSSSNRAGRGVLSDSESLAPFSFNFS
GDNLHLQTEYSVEKDVGTGDVLPASCAINKPADTAATSENAGVDNPKVVNSSSSNCGRSK
DAVNDFSHDSDVPKSREVESVFLSSHKNRSSTALEDSFTKDTSKVSRLQSPGSARTNLHV
DDTGLTSHRPKSGEVERLTSVSQANLVSTGDGHSLASVKYENFNGVQTVASSQVTSFPNP
RIGLKTSMLKVVDQLRGSKLSKHLSLGIGGEGAEKYGDKGFFSYELFVKLYTWNKMELRP
CGLVNCGNSCYANTVLQCLVFTPPLTAYFLQGLHSNACGKKGWCFTCEFESLIQKAKEGK
SPLSPIGILSKLQNIGSQLGNGKEEDAHEFLRYAIDAMQSVCLLEAGVDASGSPEEETTL
IGLTFGGCLRSKIRCARCQGKSERHERMMDLTVEIEGDIQTLEEALRRFTATEILEGDNK
YQCSRCKSYEKAKKKLTILEAPNVLTIALKRFQSGKFGKLNKAIRFPEILDLAPYMSGTS
DKSPVYKLFGVVVHLDIMNAAFSGHYVCYIKTVQNKWFKIDDSTVTPVELERVLTKGAYM
LLYARCSPRAPKLIRNRMIPSDAKIKTIPSMVNGKNAIAKSTPRDNLANYESFYMKFHRI
QRILEEDSSSDGYSFTSSNSDEGSCSTDSNRDSTSTDDFSDFIFGDSGRVWSNSDTSSLS
SSSSPSPTYLRRSQITDPEHCAAGPPETSGSRAYCADSAMNHDGSDRRPNGSGRPVDLEG
QESRIFLHSDSTTQCRKSVSRGSSSFRETDLEILGRNAPFNDVKSGVFRGRTS
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcgccggggatctagggttttctagcttagtccttgtgttctgtctggttttt
ccggtgatcggcctcgtaattcgccgtaaatggcggtttgcctcagccaggcaggaggag
atcaagagacttctgattttggcgtcgacggaggccagaagagccgaggaggaggccttt
gcttcgtacggcgtcctcccacctccttctacgaattatcagtgtgctgtttgcctttca
cccaccactacgcggtgtgctcgctgtaaagccgttcgatactgttctggaaagtgtcaa
attgttcactggcgacaaggtcacaaggaagaatgtcgtcctcctggtgctacttgcagg
attaacaatgggggaaatgatggtgatcagaaggttacttcagaccaacatgagtcattt
ggtgaaagatttgagatggaataccatgaatgctcaaaacctattgaaaatggttacggg
gaatctgcattttccggttcaagttactctcctgaagtgttacgtagcaaggacgaggac
attaaggttgagtttgatgctgttggtatcgcaacagatttgacttctgaatcatcttct
acatcattttctggattttctgctacatctagtagcaatgaatcatctgatgatctctct
gttagtgagaatgttagcttaaatgaaaacgagggatcaactggatatctgtctgctgag
acttctcatgcaatcaaggtggatcagactgagtttttatcttcgaatttcaccaattta
gttgagtcggtagatagttttaataaattaggtaaattaaataacaataaatctagctcc
ggcaatagaggcagcccgcatgcctcaaataagtcatcagttttgagtcaaactcccaca
tctgagaattcaaatgccaagccctctaagatatctgctggtttctggggaagagcgcta
gacacaaataggtctccaagccaggctttctctgacactgctgtatccagttccaacaga
gctggtcgaggagttttatctgattctgagtctttggcacccttttcattcaacttttcg
ggagataatctacatttgcagacagaatattctgtggagaaagatgttggaaccggtgat
gttcttccagcctcctgcgcaatcaataaacctgcagatactgcagccacttcagaaaat
gctggtgttgataacccaaaggtcgtgaattcctcttcctcaaattgtggaagatctaaa
gatgcagttaatgacttcagccatgattcagatgtgcccaagtccagagaagttgaatct
gtatttttgtcatctcataaaaatcgatcctctactgctctggaggattcatttactaag
gatacttcaaaagttagtagattgcaatcgcctggctctgcaaggacaaatctccatgtt
gatgacactggtcttacttcacatcgtcccaagtcaggagaagtagaaagattgaccagt
gtttctcaagctaatttagtgtctactggcgatgggcattctcttgccagtgtgaaatat
gaaaatttcaatggagttcagactgttgcatcttctcaggttacaagttttccaaatcct
aggattggtttaaaaacatctatgctgaaggttgtggatcagcttagaggatctaaattg
tcaaaacatctttctttagggattgggggtgaaggcgctgaaaaatatggtgacaagggg
ttcttctcgtatgaattatttgtgaagctttatacttggaacaagatggaactgcgacca
tgtggcctcgtcaactgtggaaacagctgttatgccaatactgtgctgcaatgtttggtg
ttcactcctcctttgactgcttattttctgcaagggctccattctaatgcctgtggaaag
aaagggtggtgcttcacttgtgagtttgaaagtctaatacagaaggcaaaggaagggaaa
tccccattatctccaataggtattctatctaaactacagaacattggaagtcagcttggt
aatggcaaagaggaagatgcacatgagtttcttaggtatgccattgatgctatgcaatct
gtgtgcctcttggaagctggggtagatgcatcaggctctccagaagaagaaacaactctt
ataggccttacatttggaggctgccttcggtcaaagataagatgtgcaagatgccaaggt
aagtcggagcgacatgaaaggatgatggatcttacagtagaaatagagggggatatacaa
accttagaagaggcacttcgacgatttacagctactgagattttggaaggagataacaaa
taccaatgcagcagatgtaagtcctatgagaaggccaaaaagaagttgacaatactagag
gctcctaatgttctgactatagctttgaagcgatttcagtcaggtaaatttggaaagctt
aacaaggcaattcggttcccggagattcttgacttggcaccatatatgagtgggacaagt
gataaatcacctgtatacaagctttttggagtggtggttcacctggatatcatgaatgct
gcattttctgggcattacgtgtgctacatcaaaactgttcaaaacaaatggttcaagatt
gatgacagcactgtgacacctgtagaactcgagagagtgttaacaaaaggagcatacatg
ctactttacgcaaggtgctccccgagggccccaaaattgattaggaacagaatgatacct
tctgatgcaaagatcaaaaccattccttccatggtgaatggaaaaaatgctattgcaaag
tctactcctcgagataatctagccaactacgaatctttctatatgaagttccaccgtata
caaaggattttagaagaggattcttcaagtgatggttattctttcactagcagcaactct
gatgaaggttcctgcagtactgatagcaaccgggattctaccagcacggatgacttttct
gatttcatatttggtgattcaggacgtgtttggagcaactctgatacttcatctttgtct
tcctcgtcctctccatctcctacgtacttgagacgttcacaaataactgatcctgaacac
tgtgctgcaggacccccagaaacaagtgggtctcgagcatattgtgctgattcagccatg
aatcatgatggttcggatagacgacctaatggtagcggcaggccggtggatttggaaggc
caggaaagtcgtatctttttgcattccgactctactacacagtgtagaaagtcagtcagt
agaggtagcagtagctttagggagaccgacttggagatattaggacggaatgcccctttc
aatgatgtaaagtccggtgtatttagaggaagaacaagttaa
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integrated database retrieval system
