Tripterygium wilfordii (thunder duke vine): 120011005
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Entry
120011005 CDS
T07256
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120011005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twl03400
]
120011005
Enzymes [BR:
twl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
120011005
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
120011005
DNA repair and recombination proteins [BR:
twl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120011005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Fpg-like_C
Motif
Other DBs
NCBI-GeneID:
120011005
NCBI-ProteinID:
XP_038717927
LinkDB
All DBs
Position
12:1786745..1800485
Genome browser
AA seq
441 aa
AA seq
DB search
MPELPEVEASRRAIEVHCLGKKIKRSIVADDSKVIDGVSPSDFEAAILGKTIVSAHRKGK
NLWLQLDSPPFPSFQFGMAGAIYIKGVVVTKYKRSAINDTDEWPSKYSKLFVELDDGLEL
SFTDKRRFAKVRLLKDPTSVPPISELGPDALFEPMTIDQFFGSLSKKKIAIKALLLDQSV
ISGIGNWIADEVLYQARIHPLQSVASLSKESCATLLKCIKEVLEKALEVGADSTQFPNNW
IFHSHEKKPGMAFVDGKVIDFITAGGRTTAYVPELQKLSGGQAAKLAGEQTKQMSKRKGG
RKDDDVDEPASEEEETAEIVKPKRESKSKGRTKKPPSKRNSKESEDDTGSVHSDGDDDDP
ASEEAVVAKSSKSKNGRESKQGGKKKPAAKRKARESDESDDQDNGEDEKRKRGKVTNDKQ
PKAASKKIAASQNGKRSTRGK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctaccggaggttgaggcgtcgaggagagcgatagaggtgcactgcctgggc
aagaagatcaagagatccatcgtggctgatgactccaaagtcatcgatggagtctctcct
tccgacttcgaggccgctatccttggcaaaacaatcgtttctgctcatcgaaagggcaag
aacttgtggctccagctcgattcccctccgtttccttctttccaattcggtatggcaggt
gccatatacattaagggagttgttgttacaaagtacaagaggtctgctattaatgacaca
gatgaatggccttccaaatattccaagttatttgttgagttagatgacggtctggagctg
tctttcactgacaagaggcgatttgctaaagttcgcttgctgaaagatccgacttctgta
cctccaatatctgaacttggccctgatgcactattcgagcctatgaccattgatcaattt
tttggatctttaagcaagaagaaaattgcaattaaggcattattgcttgatcagagcgtt
atttcgggtattggcaattggattgcagacgaagtgctataccaagcgaggattcaccca
ctgcagagtgttgccagcctgtccaaagaaagttgtgcaactttgctcaagtgcattaaa
gaggtccttgaaaaagcacttgaagtcggggcagatagtactcagttccctaataattgg
attttccattcccacgaaaagaagcctggcatggcttttgttgacgggaaggtgattgat
tttatcactgctggcggaaggacaacagcatatgttccagaattacaaaagttgagtgga
ggccaagccgcaaaactggcaggcgagcaaacaaagcaaatgtctaaaagaaaaggaggt
agaaaagatgatgatgttgatgaaccagcaagcgaggaagaggaaacagctgaaattgtc
aaaccaaagagggaatcaaagtctaagggtcgtactaagaagcctccatcaaaacgaaat
tctaaggaaagtgaagatgatactggttctgttcacagtgatggagatgatgatgacccc
gcaagtgaggaagcggtagttgctaaaagttccaaatcaaagaatggacgggagtcaaaa
caaggaggtaagaagaagcctgcagccaaaagaaaagctagggaaagtgatgaaagtgat
gatcaggacaatggagaagatgaaaagcggaaacgtgggaaggtgaccaatgataagcaa
cccaaggcagcatccaagaaaattgctgccagccaaaacggtaaaaggtctacaagaggc
aagtag
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