Tripterygium wilfordii (thunder duke vine): 120011109
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Entry
120011109 CDS
T07256
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120011109
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
120011109
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
KH_N4BP1_2nd
Motif
Other DBs
NCBI-GeneID:
120011109
NCBI-ProteinID:
XP_038718083
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All DBs
Position
12:complement(12098730..12104749)
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AA seq
713 aa
AA seq
DB search
MSHSLTPSKRPNDWKHSEPNAKRKWQRSPGLHPQNLRAKSSPGSASFRLLWPASRIDAVI
GEGGIIAQICRETGASVTVEEAIPGCDERVVVITGSDKETEVNQKAEVNEETEINQKAEV
NEEIEINQKAEVNEETEISTLKRKDDGDEEANAGKDVVDKKNHYEDDEDKKSFPVEDSKS
EIESSSAQKALLLVFEKMVEAVPVTDGGDDESNKSFTHVLRLLVLSSRVGCLLGKGGSVI
KQMSTDSGAQIRILPRDKLPLCVSGSDELVQITGEVSPVRKALQIVSQQLLEYASGEHDS
FPSNSKGTSYHSVSHPHKRSDSYPPPHVSGLRDFRESRIPGRMKPSQEILTFRLLCHDES
IGGVIGKGGAIVKTLQQETGCEITVVEAFSDSEDRIILISGPAHPDDNISPPQDALLRVQ
TRVLRAIPDSMDKNVLARLLVSSNQVGCLLGKSGSIMAEMRMLSRAHIRILGKDQIPKCA
SEDDEVVQINGDFDAVQEALLLITTKLRHHFFRDLFPSINYRSNQGFLDQVPPFASFLGR
RELSPSGMYSNLGPSVRKFDAFDGPIPRGVFHPHDDNSLFMHSIHRQGIPHHMSERKAWG
PQGLVEGGARVGFHDFPGLSQRRVPSFGGGFHPAIITNTTFEVAVPCSLIPVICGEDGAC
LKQIREISDAKITITDPKPGSTETLIIISGTPEQTHAAQSLIQAFVTSETGSS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattcgttgacgccttccaaaagaccgaatgattggaagcattctgagccaaat
gctaaaaggaaatggcaaagatcaccaggcttgcatcctcaaaacctacgcgcaaagtct
tctcctggtagtgcatcttttcgcttactgtggcctgcttccaggattgatgctgttatt
ggtgaaggaggcatcatagcacaaatctgtcgagaaactggtgcaagtgtcacagttgag
gaagctatccctggatgtgatgagagagtagttgttattacaggatcagataaagaaact
gaagtcaatcaaaaggctgaagtcaacgaagagactgaaatcaatcaaaaggctgaagtc
aatgaagagattgaaatcaatcaaaaggctgaagtcaatgaagagactgaaataagtact
ttgaagagaaaggatgatggggatgaagaggctaatgcaggcaaagatgtggttgataaa
aagaatcactatgaggatgatgaagataagaaatcttttcctgttgaggactcgaaatct
gaaatagaatcttcatcggcgcagaaggctttgttacttgttttcgagaaaatggtcgaa
gcagtaccagtgactgatggaggagatgacgaaagtaataagtccttcactcatgttcta
aggttgcttgtgctttccagtcgagttggctgcctgttgggaaagggtggcagtgtgatt
aagcaaatgtccaccgacagtggggcacagatacggattctccctagggacaaacttccc
ttgtgtgtatcaggttctgatgaacttgttcagatcacgggggaggtttctccagtcaga
aaagctcttcaaattgtttctcagcagttgttggaatatgcatcaggggagcatgattct
ttcccttccaattcaaaaggaacatcatatcattcagttagccatcctcataaaagatcg
gactcatacccaccacctcatgtttctggacttcgtgattttcgtgaaagtcgtatacct
ggtcgaatgaagccttctcaggagatcctgactttccgcttgctttgccatgatgagagc
attggaggtgtcattggaaagggaggagcaattgtaaagacacttcagcaagagacaggt
tgtgagatcacagttgtggaggctttttctgattcagaggaccgaattattcttatatct
ggtccagcgcacccagatgataatatatcacctccgcaagatgcacttcttcgtgtgcag
accagggtactaagagctatacctgatagtatggacaagaatgtgctggcaaggcttctt
gtttcttctaaccaagttggttgcctccttggcaagagtggttccatcatggctgaaatg
aggatgttatctagggcacacatacgtatattggggaaagatcagattccgaaatgtgct
tcagaagatgacgaagttgttcagataaacggggactttgatgcagttcaagaggccctt
ttgctgataactactaagttgcgccatcatttcttccgggatttatttccttctatcaat
tatcgttcaaatcaaggctttttggatcaagtacctccatttgcttcatttttgggaaga
agggaactctcaccttcaggaatgtactctaatttgggcccatcagtgcgcaagtttgat
gcctttgatggtccgattccacgcggtgtttttcatccccatgatgataattctcttttt
atgcacagtattcacaggcaaggcatcccccatcacatgtctgagagaaaagcatggggt
cctcagggacttgttgaaggtggtgcccgagtaggctttcatgactttccaggactctca
cagagaagggttcccagttttggagggggctttcatccagctataattacaaacaccacc
tttgaagttgctgttccttgttctcttattccggtgatctgtggagaagatggtgcatgt
ttgaaacaaattcgcgagatatctgatgccaagattaccataacggatccaaagcctgga
tcaacagagactctgattataatatctgggacacctgaacagacccatgcagcacagagt
cttattcaagcgtttgtaacgagtgagacgggatccagttga
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