KEGG   Tripterygium wilfordii (thunder duke vine): 120011232
Entry
120011232         CDS       T07256                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Pathway
twl03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:twl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120011232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:twl03019]
    120011232
   03036 Chromosome and associated proteins [BR:twl03036]
    120011232
Messenger RNA biogenesis [BR:twl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120011232
Chromosome and associated proteins [BR:twl03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    120011232
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st Beta-prop_WDR5 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 EIF3I Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_ACSF4 WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 120011232
NCBI-ProteinID: XP_038718223
LinkDB
Position
12:1559705..1565906
AA seq 349 aa
MATFGSAAIANQNPNKSSEVAQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEVTRSGTA
VASVPKASMSHDQPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHEAPIKEL
AWIPEMNLLATGSWDKTLKYWDLRQSNPVHTQRLPERCYAMTVRYPVMVVGTADRNMVVF
NLQNPQTEFKRIVSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDAQQNKNFTFKCH
RDNADIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSAFNNDG
SIYAYAVCYDWSKGAENHNPATAKTNIYLHLPQEAEVKAKPRAGTSGRK
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggctacttttggctccgctgctatcgcaaatcaaaaccctaataaatcgtccgaggtg
gctcaacctcctagtgattctgtttcaagcctttgttttagtcccaaggccaattttctg
gtagccacttcatgggataatcaggttcgatgttgggaggtaacacgaagtggaaccgca
gtagccagtgtgcccaaggcatcaatgtcgcatgaccaaccagttctatgctcaacttgg
aaggatgatggaacaactgtcttttctggaggctgtgacaagcaggtgaagatgtggcct
ctgctctctggtggtcaacctgttacagttgcaatgcatgaagcacctattaaggagctt
gcttggattccagagatgaaccttttagccacaggaagctgggacaagacactgaagtac
tgggatttaagacagtcaaaccctgttcatactcagcggcttcctgaacggtgctacgca
atgactgtgaggtatcctgtgatggtcgttggtactgcagacagaaatatggtagtattt
aatttgcagaaccctcagacggagttcaagagaatcgtttcaccactgaagtatcagacg
agatgtctcgctgcttttcctgatcagcaaggttttctggttggttctatagaggggagg
gttggtgtacatcatctggatgatgcacaacaaaataaaaacttcacattcaaatgtcat
agagacaacgccgatatatactctgtcaattccttgaacttccaccctgtgcaccatacg
tttgcaacagctggatcagatggtgcttttaatttttgggacaaggatagcaaacagaga
ctcaaggccatgtcaaggtgcagccaacctataccttgcagtgctttcaacaatgatggc
tcaatatatgcatacgcggtgtgctatgactggagtaagggtgcagagaatcacaaccca
gcaacggcaaagaccaacatttacctgcacttgccacaggaagctgaggttaaagccaag
ccacgagcgggaacaagtggtagaaagtaa

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