Tripterygium wilfordii (thunder duke vine): 120011281
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Entry
120011281 CDS
T07256
Name
(RefSeq) tRNase Z TRZ3, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
twl03016
]
120011281
Enzymes [BR:
twl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
120011281
Transfer RNA biogenesis [BR:
twl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
120011281
Prokaryotic type
120011281
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
120011281
NCBI-ProteinID:
XP_038718287
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All DBs
Position
12:2518472..2525181
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AA seq
951 aa
AA seq
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MPQIGTPLRLFFSASPLLAPLKPSLSLGRTKSFSFFTSISSCFSQRRHAAARQSSNIRKR
SSSTFKEDRSRYGNRDKGLLMDETQSLAFNKRKAEGGDKSDKSKRNLQHKERKLNPVNTI
AYVQILGTGLDTQDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDYIFLSRVCS
ETAGGLPGLLLTLAGIGEQGMSVNVWGPSELKYLVDAMKCFIPHAAMVHTSSSGSTSSSE
AAALPNTSKFVDPIVLVKDEVVKISAFLLQPSSSQGSAKKPVDMSVVYVCELPEIMGKFD
PVKAKALGLKPGPKYRELQLGNSVKSDRHDTMVHPSDVMDSSVPGPIVLLVDCPTESHVQ
ELLSTRSLNNYYADSSSNGTETTKTVNCVIHLSPTSIVRSPLYQKWMKKLGSAEHIIAGH
EMKNVEIPILKSSARIAARLNYMCPQFFPAPGFWSLQHFEKSSSDSVIQSEAPVAKLCES
ISAENLLKYTLRPYAHLGLDRSCIPSLMSPSDVINELLLETPDIADAARLIRNLWHEYRE
TKEEIHPVEGNGVMIEEPWLDEKTKPPCLENIRRDDLEIVLLGTGSSQPSKYRNVSSVYI
NLFSKGSLLLDCGEGTLGQLKRRYGVEGADNAVKNLSCVWISHIHADHHTGLARILALRR
DLLKGVPHRPLLVVGPRQLKRYLDAYERLEDLDMQFLDCRNTMKGSWEAFEENNESNKDS
LSTGSPDNLEEMSNRVTTNIESTIFARGSPMQSYWKRPGSAVDNSPAFPLLKTLKEVLTE
AGLETLISVPVVHCPQAFGIALKASERSNSVGKVIPGWKIVYSGDTRPCPELVEASRGAT
VLIHEATFEDGMMEEAVAKNHSTTKEAIEVGDSAGAYRIILTHFSQRYPKIPVFDDTHMH
KTCIAFDMMSVNIADLPLVPKILPYIKLLFRNEMVVEDELDDAMNALTATL
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaatcggtactcctctgcgcctcttcttctccgcttctccactcctcgctcca
ctgaaaccctctctttctctgggcagaaccaaatctttctctttcttcacctccatctct
tcttgcttctcacaacgacgccacgccgccgctcgtcagtcctccaatatcagaaagagg
agcagcagtacattcaaggaggacaggagtagatacggaaacagggacaaagggctccta
atggatgaaactcagtccttggcgtttaataaaagaaaggccgagggaggagacaagagt
gataaatccaagaggaatctgcagcataaagagcgcaagctcaatcctgtcaataccata
gcctatgtgcagattttagggactggattggatactcaggatacatcgccttcagtcctg
ctcttctttgacaagcaaaggtttatttttaatgctggagagggactacaacgattctgc
acagagcataaaattaagttatcgaagattgattatatatttctctctcgtgtctgctca
gagacagcgggtggacttccaggtttgcttttgactctggctggcattggagaacaggga
atgtctgtcaatgtatggggtccatctgaattaaagtatttagttgatgcgatgaagtgt
tttatcccacatgctgccatggttcatacgagtagttctggttctacttcttcttctgag
gctgcggctttgcctaatacaagtaagtttgtggaccccattgttcttgtgaaagatgag
gttgtcaagatatcagcatttctcctgcaaccaagttcctcacaagggtctgcaaaaaag
cctgttgatatgtctgtcgtatatgtttgtgaattgccggaaattatggggaaatttgat
ccggttaaagctaaggcccttggtttgaaacctggtccaaagtatagagaactacaactt
ggtaattcagtgaagtcagatcggcatgataccatggttcatccaagtgatgtgatggat
tcttctgttcctggtcctatcgtattacttgtcgactgcccaacagaatctcatgtacag
gaattattatccacacggtccctcaataattattatgccgattcctcatctaatggaaca
gagactacaaagactgtgaactgtgtcattcatttaagtcctacctctattgtgagaagt
cctctttatcagaagtggatgaagaaacttggctcggcagagcatattatcgctggacat
gaaatgaagaatgtggaaattcccattttgaaatcgagtgctagaatagcagcacgactt
aattacatgtgtcctcagttctttccagccccaggattttggtctcttcaacattttgaa
aagtcgtcatcagattctgttattcagagtgaggctcctgttgcaaagctatgtgaaagc
atttctgctgaaaatctcttgaagtacactttgcgtccttatgctcatcttggattggat
agatcttgtattccaagtttgatgtctccatcagatgtcatcaatgagctactcttagag
actccagatattgctgatgctgcccgactgatcaggaatttatggcatgagtatcgagaa
acaaaggaggagattcatccggtagaaggtaatggagttatgattgaagaaccgtggcta
gatgagaagacaaagcctccttgtttggaaaacataaggagggatgacctggagattgtt
cttctgggaacaggttcgtcccagccttctaagtataggaatgttagctctgtctatatc
aatttattctcgaaagggagtttgctcttagattgtggggaaggaacgctgggacaacta
aaacgaagatatggagtggaaggtgctgataatgctgtaaagaatctgagttgcgtttgg
atttctcatatacatgctgatcaccacacgggtttagccagaattcttgctctgcgacgt
gatttgttgaagggagtgcctcatagaccattacttgttgttggaccgcggcagcttaag
agatatctggatgcatatgaaagacttgaagatctagatatgcagttccttgattgtaga
aacaccatgaaaggttcatgggaagcttttgaggaaaataatgaatcaaataaggatagc
ttatctacaggaagtccagataatttagaggaaatgagcaatagagtaacaacgaatatt
gagtctactatatttgctagaggtagtccaatgcaaagctattggaagagacctggtagc
gcagttgacaatagcccggcatttccattattgaagacattgaaggaagtgctaacagaa
gcaggattggagactttgattagtgtcccggtggtgcactgtcctcaggcatttggtatt
gccttgaaggcgtcagagagaagcaatagtgttggaaaagtgataccaggatggaagatt
gtgtactcaggtgacacaaggccttgccctgaactggtagaggcatctcgtggagctacg
gttcttatacatgaggcgacgttcgaggacggaatgatggaggaggctgtggcaaaaaac
cacagcacaacaaaggaagccatagaagttggagactctgctggtgcatatcgcatcatc
ctcacccatttcagccaaagataccccaaaatccctgtatttgatgatacccacatgcac
aaaacatgcattgcgtttgacatgatgagtgttaacatagcagatttgcctcttgtccct
aaaattcttccatatattaagctgctcttcaggaatgagatggtagttgaggatgaatta
gatgatgctatgaacgctctaactgccactttgtaa
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