Tripterygium wilfordii (thunder duke vine): 120011728
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Entry
120011728 CDS
T07256
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120011728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
120011728
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120011728
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
HECT type E3
120011728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
120011728
NCBI-ProteinID:
XP_038718760
LinkDB
All DBs
Position
13:complement(3015084..3025694)
Genome browser
AA seq
1568 aa
AA seq
DB search
MGSRGQKRAEMVDELPADKRACNSLDFRAGSSNSSNHSHLISPNSASENHDNDMDTSSSA
SGSSDGEPERDSAYGSCDSDDVNLRQGSLKEYQRRRSSSDLGKLKSILGSLSEETDSSKQ
LVMLTELCEVLSFCTENSLSSMMANLLSPVLVKLAKDENNPDIMLLAIRAITYLCDVFPR
SSGFLVRHDAISALCQRLMAIEYLDLAEECLQALEKLSRDQPLACLNAGAIMAVLTYIDF
FSTSVQRVAVSIVVNICKKLPSECDAPFMDAVPVLSNLLQYEDLQLVENVAVCLIKIVER
MSHSSEMLDELCKHGLIHQATKLISINGRKALPQPIYNSLIGLLVKLCSGSVLAFKTLHE
LNISGILKDILSTYDLSHGVSSPSMVDGHCNQVHEVLKLLNELLPTSDRDQCVQQLSDKE
SFLVNHPDLLQKFGVDIFPMLIQVVNSGANIYVCYGCLSVINKYVYLSKSDILIELLKNA
NIPSFLAGVFTRKDQHVLILALQITEIILQKHPDLFLSSFIKEGVFFAIDALLSPEKCQH
MIFPVFNGIQLPVDSSQKSATSVVRRCLCYAFDTVQHTSVSETKTCKLEKDRVQDLAKHI
RTSYFTLEVCDSEKGLTDILQKLRTLSAALSDLMNVSGNTEPATQDEEKFYCILHQIVFN
LSGRESVSTFEFIESGIVKSVLNYISNGFYLKGNIEGNVSCSYFYVIAKRFEVFARLFLS
SSDTLGEGPPSLVLIQKLQNALSSLENFPVILTHASRLRNSFATVPNERSNKYPSLRILF
VRGDGESCLSDYSGDVVTVDPFSSLDAIEGYLWPKVGIKRNEQRESTLQAMEPIDSAPSG
LAPNANSSQGKCPGDTEPDSMSAALREMQVEEANLLPSTSEQVINSRERNSGEITLDETR
TASTGQELQFSSEVVTNVKSENPESCSITASSPKLVFYLEGEQLDRSSTIYQAILQQQIQ
LGDEVIAGAKLWSQVYTITYGMAVKSIQEDHQISLHSAENFPVSNNFDTQLQNSPFLSRM
FASGVASDLDNSNPTYDILFLLKILEGLNRFASHLISHKRICDFAEGLIDDMDNLRLVVP
SVAQNEFMCSKLTEKLEQQMRDSLAVSVGGLPLWCNQLMASCPFLFSFEVKCKYFQLSAF
GRQQLQAHVPSQTNLGGSRDRRSSGGSLPRKKFLVLRNQILESATKMMNLHAHNKVLLEV
EYDEEVGTGLGPTLEFYTLVCHEFQKPGLGMWREDLGSFTTRKILQTDDLGVVMSSLGLF
PCPWPSMVVTSDGMQFSEVKKRFYLLGQVVAKALQDGRVLDLPFSKAFYKLILGQDLSLY
DIRSFDPELGRTLLEFQALVNRKKHLASCGNQSALKVESCYRNTRIEDLYLDFTLPGYPF
YVLTSGPDHKMVNIDNLGDYIMLVVDATVHSGISRQFEAFKSGFNQVFPIERLQIFTEEE
LERLLCGEHDFWAFNELLDHIKFDHGYTASSPPVISLLEIIQEFDYEQRRAFLQFVTGAP
RLPPGGLASLNPKLTIVRKHCSSCADGDLPSVMTCANYLKLPPYSSKERMKEKLLYAITE
GQGSFHLS
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtcgtggccaaaagcgtgcagaaatggttgatgaattacctgctgataagcga
gcttgtaattcgttggattttagagctggttcgtcgaactcatcaaatcacagtcacttg
atctctcctaattcagcatctgaaaaccatgacaatgatatggatacatcctcatctgct
tcgggttcctcagatggagaaccggagagggattctgcatatgggtcctgcgattctgat
gatgtaaacttgagacaaggcagcctcaaggagtaccagaggaggagatcctctagtgat
cttggaaaattaaagagtatattggggagtttgagtgaagagactgactcctctaagcag
ttagttatgctgacagagctatgcgaagtgttgtcgttttgtacagagaactctctttcc
agtatgatggcaaacttgttgtctcctgttcttgtaaagcttgctaaggatgagaacaat
ccggatataatgctgttggctataagggctataacttatttatgcgacgtgtttcctcga
tcttcgggtttccttgttcgacacgatgcaatttctgcgctttgtcaaagattaatggct
atcgagtacttggatctagctgaagagtgtcttcaagcgctggagaaattatcacgagat
caaccacttgcatgtttaaatgctggggcaattatggctgtactaacttatattgatttc
ttctcgaccagtgtacagagagtagcggtttctattgttgtgaacatatgcaaaaaactt
ccttcagaatgtgatgcacctttcatggatgctgttccggtgttgtccaatcttctccaa
tatgaggatctgcagcttgttgaaaatgtagctgtctgcttgattaaaatagtggagcgg
atgagtcattcctcagaaatgcttgatgaactctgtaagcatgggctaattcatcaagct
acaaaactcataagcataaatggcagaaaagctctgccgcagccaatttacaatagtctg
attggactacttgtcaaactctgttctggctcagttttagctttcaagactttacatgag
cttaatatcagtggtatactgaaggatatattatctacttatgacctctcacatggagtg
tcttctccatctatggttgatgggcattgtaatcaggtacatgaagttcttaagttgctg
aatgagcttctccctacttcagatagagatcaatgtgtccagcagctgtctgataaggaa
tcattcttagtcaatcaccctgatcttctgcagaagtttggagtagacatatttcccatg
ctgattcaggtggttaattctggtgccaatatatatgtttgctacggctgcctatccgtg
atcaacaaatatgtttacttgagcaaatctgacatactcattgaattgcttaagaatgcg
aatattccaagttttctagctggggtctttactagaaaggatcagcatgtgcttatatta
gccctgcagattactgagataattctgcaaaagcatcctgacttgttcttgagctcattt
ataaaagaaggtgttttctttgctattgatgctcttctatcacctgaaaaatgtcaacac
atgatctttcctgtgttcaatggcatccagctgcctgttgactctagccaaaaatctgca
acgagtgtggtccgcagatgcttatgttatgcttttgatactgttcagcatacttcagtg
tcagaaacaaaaacatgcaagcttgaaaaggatagggttcaagatcttgcaaagcacata
agaaccagttacttcactctagaagtttgtgattctgagaaagggttgactgatattctt
caaaagctcagaactctttctgctgctttgagtgatttgatgaacgtgtctgggaatacc
gaacctgccactcaagatgaagaaaagttctactgtatattgcatcaaatcgtgttcaat
ctaagtggaagggaatctgtttccacatttgaattcattgaaagtggtattgtgaaatca
gtactgaactacatctcaaacggattctatttgaaaggaaacatagagggtaatgtttca
tgtagttatttctatgtgatagcaaaaaggtttgaggtgtttgctaggctatttttgtct
tcttcagacacccttggcgagggcccaccttcgttagttttaatacagaaattacagaat
gccctttcttccttggaaaactttcctgtcattttaacacatgcatctaggctcaggaat
tcatttgctactgtcccaaatgagcgttccaacaagtatccatccctaagaattcttttt
gtgaggggagacggcgagtcatgcctcagtgattactctggagatgttgtgactgttgac
cctttctcttcattggatgctattgaaggatatctgtggcctaaagtaggcataaaaaga
aatgaacaaagagaatcgactcttcaagctatggagccaattgacagtgcaccatcagga
ttggcaccaaatgcaaattccagccaaggcaaatgtccaggtgatacagagcctgacagc
atgtccgctgctttgcgtgagatgcaggtagaggaggctaacttattaccatccacatcc
gaacaagttattaattcaagagagagaaattctggtgaaataaccttagatgaaactcgt
actgcctctacagggcaggaactacagttttcctctgaagtagttacaaatgtgaaaagt
gagaaccctgaatcctgtagcattacagcttcctctccaaaactggtattttacctggaa
ggagaacagctggaccgatcctcgacaatatatcaagcgattctccagcaacaaatacaa
ttaggcgatgaagttattgctggggcaaaactgtggagtcaagtatacacaataacttat
ggaatggctgtaaaatctatccaggaagaccatcaaatatctcttcattcagctgaaaat
ttccctgtgtcaaataattttgacacacaactgcagaatagccctttcctttctcgcatg
tttgcttctggggttgcttctgacttggataactcaaaccccacttatgacattttattt
ctgcttaaaattttggaaggattaaataggtttgcgtctcatctgatctcccacaaaaga
atatgtgattttgcagaagggttgattgatgacatggataatttaaggttggtagttcct
tctgtagcacagaatgaatttatgtgcagtaaattaacagaaaaattagagcagcaaatg
cgggatagtttagctgtgtctgttggcggtttgcctttgtggtgtaatcagttaatggct
tcatgcccatttctgttcagttttgaagtaaaatgtaagtactttcaactgtcagccttt
ggtcgtcagcaacttcaagctcatgtaccttcgcaaactaatttgggtggttcaagagac
aggagatctagtggtggcagtttacctcggaagaagttcttagttttgcggaaccagatt
ctggagtctgcaaccaaaatgatgaacttgcatgctcataataaagttcttcttgaagtg
gagtatgatgaagaagttggtactggccttggtccaacactggaattctataccctggtt
tgtcatgagtttcagaaacctggccttggaatgtggagagaggatcttggttcgtttacc
accaggaaaatcttgcaaactgatgatttgggagttgtgatgtcttctcttggacttttt
ccctgcccatggccctctatggtagttacatccgatgggatgcagttttcagaagtgaaa
aaaagattttaccttttggggcaagtagtggcaaaggctcttcaagatggaagggttttg
gatctgcccttctccaaggccttctataaacttatccttgggcaggatcttagtttatat
gatatacggtcattcgatcctgagcttggcaggacactgctagagtttcaggctcttgtt
aataggaagaaacatttggcctcctgtggcaaccagtcggctttaaaagttgaatcatgc
tatcgtaacaccagaattgaggatctttatcttgactttacgctccctggttatcctttt
tatgttcttacttctggaccggatcataaaatggtaaatatagataacttgggggactat
atcatgcttgttgtggatgctactgtgcattcaggaatatcaagacaatttgaagctttc
aaatccggatttaaccaggtttttccaattgagcggcttcaaattttcacagaggaggaa
cttgagcgtttactatgtggagaacatgacttttgggctttcaacgagctcttggatcat
atcaagtttgaccatggatacaccgctagcagcccaccggtcatcagtttactagaaatt
atacaggagttcgattatgaacaaagaagagcgttcttacaatttgtgactggagcacct
cggctccctccaggaggtttggcatctcttaatccaaaactgacaattgttcgaaagcat
tgtagcagttgtgcagatggagacctgccgagcgtgatgacatgtgccaattacttgaag
ttgccaccttacagttcaaaagagaggatgaaggagaaactcttgtatgcaataacagaa
ggacaaggttcattccacctttcatag
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