KEGG   Tripterygium wilfordii (thunder duke vine): 120011846
Entry
120011846         CDS       T07256                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Pathway
twl03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:twl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    120011846
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:twl03036]
    120011846
Chromosome and associated proteins [BR:twl03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     120011846
    NSL complex
     120011846
   HMT complexes
    COMPASS/SET1 complex
     120011846
    COMPASS/SET1 complex (yeast)
     120011846
    MLL-HCF complex
     120011846
    MLL3/MLL4 complex
     120011846
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     120011846
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_SPT8 WD40_RFWD3 Beta-prop_NWD2_C WD40_like Beta-prop_HPS5 eIF2A Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_Nup120_160 Beta-prop_IFT140_1st RMC1_N Beta-prop_WDR35_TULP_N VPS8_N Beta-prop_VPS8 WDR54 PROPPIN Beta-prop_IP5PC_F Ge1_WD40 WD_LRWD1 DUF5888 Cytochrom_D1 VID27 RAB3GAP2_N
Other DBs
NCBI-GeneID: 120011846
NCBI-ProteinID: XP_038718912
LinkDB
Position
13:12172126..12174885
AA seq 338 aa
MFVLLQSSINQAEKQQPRMSTTDPTESFETYTLAQTLTGHKRAISSVKFSPDGRLLASSS
ADKTLRTYSSDSGNAPSFSFLHEFSGHEQGVSDVAFSADSRYLASGSDDKTVRLWDGSTG
SLLKTLQGHTNHVFCVNFNPQSNVIVSGSFDETVRLWDVKTGKCLKVLPAHSDPVTAVDF
SSDGSLIVSSSYDGLCRIWDASTGHCIRTLIDDENPPVSFVKFSPNSKFILVGTLDNNLR
LWSLSAGKFLKTYTGHVNAKFCISSSFSVTNGKYIVSGSEDNCIYLWELQTRRIVQKLEG
HSETVIAVSCHPTENVIASGALGNDKTVKIWSQQRKND
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgttcgttttgcttcagtcatccatcaatcaagcggagaagcagcagcccagaatgtcg
acgacggacccaacagaatctttcgaaacttataccctagcccaaaccctaacggggcac
aaacgtgccatctcgtccgtcaagttctcgccggacggccggctcttggcatcgtcctct
gctgacaaaaccctccgcacatactcttcagattccggtaatgccccttccttctccttt
ctccatgagttctctggtcacgagcagggcgtctcagacgtagccttttctgccgattcc
cgctacctcgcgtcgggctccgacgacaagaccgtccgactgtgggacggctctaccggc
tccctgctcaaaaccctacaaggccacaccaaccacgttttctgcgtcaatttcaatccc
cagtcaaatgtgatagtgtccggctccttcgacgagaccgtccgcctttgggacgtcaag
accggcaagtgcttgaaggtacttcccgcgcactctgaccccgtcactgcagtcgacttc
agctcggacggctcccttatcgtttccagtagttacgatgggttgtgtaggatttgggat
gccagtacgggccattgtattaggacattgattgatgacgagaacccgcccgtctctttc
gtgaagttctctcctaacagcaagttcattctcgtcgggactctcgataacaatttgagg
ctctggagcttatcagctggaaagtttctcaagacatatacgggccatgttaatgcaaag
ttttgcatttcatccagtttttctgtgacgaacgggaagtatatcgtcagtggatccgag
gataattgtatctacttgtgggaactgcaaacccgaagaatagttcagaaattggaaggc
cacagtgaaactgttatagctgtatcatgtcatcccacggagaacgtgattgcttctggt
gctctaggcaatgacaagacagtgaagatctggtctcagcaaagaaaaaatgattga

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