Tripterygium wilfordii (thunder duke vine): 120011925
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Entry
120011925 CDS
T07256
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120011925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
twl03009
]
120011925
Enzymes [BR:
twl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
120011925
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
90S particles
Other 90S particles
120011925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
120011925
NCBI-ProteinID:
XP_038719026
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All DBs
Position
13:3698837..3702464
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AA seq
291 aa
AA seq
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MVRSYGVKVHKRKKREENYDKEEDEVEEQSIQAAKKKALTSTKQDEDVEKKAREDESKEE
EEEAPLEVLEGIPAGPSDQKALKRGVIFVLERASLEVGKVGKSYQLLNSDEHANFLRRNN
KNPADYRPDIIHQALLSILDSPLNKAGMVRSIYVKTEKGVLFEVRPHVRIPRTFKRFAGL
MLQLLQKLSITAANKREKLLRVIKNPVTQYLPVNSRKTGLSYSSEKLVDIQKYVATIGDD
MDLVFVVGAMAHGKIDNDYTDDWVAISGYPLSAAFCISMICQGVAKKWNVL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggtcttatggagtcaaagtgcataaacggaagaagagagaggagaactatgat
aaagaagaagacgaagttgaagaacaatcaattcaagcagccaagaagaaggctttaaca
tctaccaaacaagatgaagatgttgagaagaaagcgagggaagatgaatcaaaagaagaa
gaagaagaagcaccgttagaggtacttgaaggtattccagctggtccaagtgaccagaag
gccctgaaacgtggagtcatttttgttcttgagagggcctccttggaagttggaaaagtt
gggaagagttaccagcttttgaattcggatgaacatgccaatttcttgcggaggaataac
aaaaatcctgctgattacagacctgatattattcatcaggctctcttgtcgatcttggat
agcccacttaataaggccgggatggtgcgatctatatatgtgaaaactgagaaaggggtt
ctttttgaagttcgaccacatgttcgtattccaaggacttttaagcgatttgctggcctc
atgttgcagcttttacagaaacttagtataactgctgccaacaagcgtgagaaactttta
cgtgtgatcaagaatcccgttacccaatatcttcctgtcaactctcgtaaaacaggcctc
tcttatagttcggaaaaattagttgatattcagaagtatgtagcaactattggtgatgat
atggatcttgtttttgtggttggtgcaatggcccacgggaaaattgacaatgattatact
gacgattgggtagcaatttctggttatcctcttagtgctgccttctgtatatcaatgatt
tgccagggtgttgcaaagaaatggaacgtactataa
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