Tripterygium wilfordii (thunder duke vine): 120012063
Help
Entry
120012063 CDS
T07256
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
120012063
03036 Chromosome and associated proteins [BR:
twl03036
]
120012063
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
120012063
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
120012063
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
SPT6_acidic
HHH_9
Spt6_S1
Tex_central_region
HTH_44
HHH_3
SH2
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
120012063
NCBI-ProteinID:
XP_038719234
LinkDB
All DBs
Position
13:complement(3337968..3349450)
Genome browser
AA seq
1828 aa
AA seq
DB search
MARNVVSDEDERDEVGLEDEYEDREPLDAEELDNRDEYEEDEEEENGQDFYEKDGFIVDD
EEEEDQDEEEEERVSSDEERQKKKKKRKKKETEDVLDEDDYELLRDNNAFYPRMKESKKF
KRLKKAQRDSGNHSGFSDEEFDGSGKGGRTAEEKLKLRLFGDDEGGPLEDIAEEEEQAEE
EEDADIGEEDEMADFIVDEEEVDENGAPVRRRKLGRKKNRQAPGVSSSALQEAHEIFGDV
DELLQLRKQGLESSEWKERKLEDEFEPIILSEKYMTKQDEQIRGTDIPERMQIFEESIGP
PLMDETSLLDESSWIDNQLNQLPSGVVPLPIDDKKPAVNRDDIIRFLELVHVQKLDIPFI
AMYRKEECLSLLRDPMQHEDDGENEDRSGLTTTLKWHKLLWAIHDLDRKWLLLQKRKNAL
HLYYNKRFEEESRRIYDETRLNLNQQLFESIVKSLKAAESEREVDDVDVKFNLHFPPGEV
GVDEGQYKRPKRKSQYSICSKAGLWEVASKFGHSAEQFGRELFYVELNDELEDAKETPEE
MASNFTCAMFETSQAVLKGARHMAAVEISCEPSVRKWFRGFFMERAVVSTSPTPDGNLAI
DSFHQFAGIKWLRMKPLSAFKDAQWLLIQKAEEEKLLQVTFKLSDETLSVLKEEFDGHYL
SRGVSKSAQVWNEQRRLILHDAIYSFLIPSMEKEVRSLLTSRAKSCLLLEYGNALWNRVS
VGPYQKKENDLSDDEAAPRVMACSWGHGKPATTFVMLDSSGEVLDVLHAGSLSLRSQNVN
DQQRKKQDQQRVLKFMTDHQPHVVVLGAVNVSCIRLKDDIYEIIYKMVEENPRDVGHEMD
ELSIVYGDESLPRLYENSRVSSDQLPGQPGIVKRAVALGRYLQNPLAMTATLCGPGREIL
SWKLDPLENFLTSDEKYGMVEQVMVDATNQAGLDINLAMSHEWLFAPLQFISGLGPRKAA
SLQRSLVRAGAIFTRKDFVTTHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIH
PESYGVAQELAKDVYDEDVNGDTNDDEDALEMAIEHVRDRPNLLKSLKIDSYLESKNREN
KRETFDDIRRELMQGFRDFRKAYKEPSQDEEFYMISGETEVTLAEGIIVQATVRKVLSQK
VICALENGLTGMLMRESVADDNVELSDQLHEGDILTCRISSVLKNRYQVFLSCKESDMRN
NHYQYAQNLDPYYHEDQSSVRNEQEKARKEKELAKKHFKPRMIVHPRFQNITADEAVELL
SDKDPGESIIRPSSRGPSYLTLTLKVFDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGE
DTFEDLDEVMDRYVDPLVGHLKAMLSYRKFRRGTKTEVDELLRIEKSEYPMRIVYAFGIS
HEHPGTLILTYIRSTNPHHEYVGLYPKGLKFRKRMFEDIDRLVTYFQRHIDDPLHDSAPS
IRSVAAMVPMRSPATGASVDSGWGGSTNEGGWKGQSFDRDRSSTPGSRTGQNDYRNGGGR
DGHPSGLPRPYGGRGRGRGRGSYNSSRGNGADNERQDGGYDTTTKWDSDSKGENDGWTKF
PGAKVQNSPGREAFPGGWGTGGSGSGGGNNTGWGQDSGGGNNSGWGQGSGGGSGGGGGGG
GGGGGSGGGGSSWGATAGGGDNNAGWGQGGGGGGGGSGGGGGSSWGATAGGSGGNNAGWG
QGSGGGSEGGGGGSSWGSTGGGGGNNAGWGQGSGGGATAAAGGGGGGNNAGWGQGSGGSK
KGNGGGSSWGADGGEKGSGGGSEKGSGGGSSWGAASEKGSGGSNTGWGQGSGGGGSEDGG
SGWGTSSKKSSTPSRPDNGWSGGGGGGW
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atggctagaaacgttgtttccgacgaggatgaaagagatgaggtcgggcttgaagacgag
tacgaggatagggaacctttggacgccgaagaactcgataatcgggatgaatatgaagag
gatgaggaggaagaaaatgggcaagatttttatgagaaggatggctttatagttgatgat
gaggaagaagaggatcaagacgaagaagaagaagagagggtgagcagcgatgaggagagg
cagaaaaagaagaagaaaaggaagaaaaaagaaacggaggatgtacttgatgaagatgac
tatgagctgcttcgggataacaatgcattttatccacgtatgaaggagagcaaaaaattt
aaaagattgaagaaagctcagagggattcaggcaatcactctggattttctgatgaagag
tttgatggaagtggtaaaggtggaaggactgctgaggagaagcttaagctccgcttattt
ggtgatgacgaaggtggaccgcttgaggatatagctgaagaggaggagcaagcagaagaa
gaggaggatgcagacattggcgaggaggatgaaatggctgattttattgttgatgaggaa
gaagttgatgagaatggagctcctgtgagacggagaaagttggggagaaagaaaaataga
caagcaccgggagtttcatcatctgctttgcaggaagctcatgagatatttggtgatgtt
gatgaactcttgcaacttcggaaacagggtctagagtccagtgaatggaaagaaaggaaa
cttgaagatgaattcgaaccgattatcctttcggaaaagtacatgaccaaacaggatgag
cagatcagggggactgatattccagaaagaatgcagatctttgaggaaagcattggtcct
cctttaatggatgaaactagtctgttagacgagagcagctggatagataatcaactgaat
caacttccaagtggtgtggtacccttaccgattgatgataaaaagccggctgtaaacaga
gatgatattataagattcttggagctagtgcatgtgcagaagctagatattccttttatt
gcaatgtaccggaaggaagagtgcctcagcttgttgagagatcctatgcagcatgaagat
gatggcgagaatgaggatagatctgggttaacaaccacactaaaatggcataagttactt
tgggcaattcatgacctagacagaaagtggttgcttcttcagaagcgaaagaatgcactt
catttatattataataagcgatttgaagaagaatctcgccggatatacgatgaaacaaga
ctcaacttaaatcagcagctatttgaatcaattgtcaagtcacttaaagctgcagaatca
gaaagagaggttgatgatgttgatgtgaaatttaacttgcattttcctcctggtgaagtt
ggtgtggatgaggggcagtataaaaggccgaaaaggaaatcacagtacagcatctgcagt
aaggctgggctttgggaggttgccagcaagtttggccacagtgctgagcaatttggacga
gagttattttatgtggagctgaatgatgaattggaagatgctaaggaaacgccagaggag
atggcatcgaacttcacttgtgcaatgtttgaaacatctcaagccgtcctcaagggggcc
aggcacatggctgcggtggagataagttgcgaaccatctgtgaggaaatggttccgtggt
ttctttatggagagggctgttgtatctacaagtccaactcctgatgggaatttggctata
gattctttccatcagtttgctggaattaaatggttgcgtatgaagccactgagtgcattt
aaggatgcacaatggctgcttatccagaaggctgaagaggagaagctgcttcaagtcact
ttcaagctgtctgatgaaactcttagtgtgttgaaagaagagtttgatgggcattatctt
agtcgcggtgttagtaaatctgctcaagtttggaatgagcaaagaaggttgatattgcat
gatgcaatatatagttttcttataccttccatggagaaagaagtacgatcactgttgact
agtagggctaaaagttgcttacttttagagtatggtaatgcattgtggaatagagtctct
gtggggccatatcaaaagaaggaaaatgatctttctgacgatgaagcagcaccaagagtg
atggcttgctcttggggccatgggaagccagcgacaacttttgtcatgctggattcatca
ggagaagtgctagatgtgttgcatgcggggtctctctctttacgatctcaaaatgttaat
gaccagcaaaggaagaaacaagatcaacaacgtgttttgaagttcatgacggatcatcaa
cctcatgtcgtcgttctaggagctgtgaatgtgtcctgtattcggcttaaggatgacatt
tatgagatcatttataagatggttgaagaaaatcctagagatgttggtcatgagatggat
gagctgagcattgtatatggagatgaatctctgcctcgcctttatgaaaattctcgtgta
tcatctgaccagttacctggacagccaggcattgtcaagcgggctgttgctcttggacga
taccttcaaaatccactggcaatgaccgcaactctttgtggaccagggagagagatttta
tcttggaaacttgatcctttagagaactttctcacttctgatgagaagtatggaatggtg
gaacaagtgatggtagatgctacaaaccaagctggccttgacattaacttggctatgagc
cacgagtggttatttgcacctttgcaattcatatctgggcttgggcctagaaaggcagct
tccttgcagaggtctctggtaagagctggggctatattcacacgaaaagactttgtaaca
acccatggacttggtaaaaaagtgtttgtcaatgcggttggttttttgcgtgtccggcgg
agtgggctggctgctagcagcagccagttcattgatttattggatgatacgagaatccat
cctgaatcttatggggtggcgcaggagttagcaaaagatgtttatgatgaagatgtcaat
ggggatacgaatgatgatgaagatgcacttgagatggcaatagagcatgttagagaccgg
cctaacttattgaaaagcctcaaaattgattcctatctggagagcaaaaaccgtgagaac
aagagagagacatttgatgatattagaagggagttgatgcaaggttttagggattttcgt
aaagcttacaaagaaccaagtcaagatgaggaattctacatgatttcaggtgaaactgag
gttacgttggctgaaggtattattgtgcaggctacagtccgcaaggtgctaagtcagaag
gttatctgtgctcttgaaaatgggttgactggaatgctaatgagggaaagtgttgccgat
gataatgttgagttgtctgatcagctacatgaaggggacatactgacttgcaggatttca
tcagttctgaaaaacagatatcaggttttcctatcttgtaaagagagtgatatgagaaac
aaccattatcagtacgctcaaaaccttgatccctattatcatgaagaccagagcagtgtg
cgaaatgagcaggagaaagctcgtaaagagaaggagcttgccaaaaaacattttaaacca
agaatgattgttcatccccgtttccagaatataactgctgatgaagcagtggagttgttg
tctgacaaggatcctggtgaaagcattatacgcccaagttctcgtggaccttcgtattta
actctaacactgaaggtgtttgatggagtttatgctcacaaagacatagttgagggtgga
aaagaacacaaggacattacaagcttgcttcgcattgggaagacactgaaaattggggag
gatacttttgaggacttggatgaggtaatggatcgatatgtggatcccttggtgggtcat
ttaaaggctatgttaagttatcgcaagttcaggaggggcactaaaacagaagtggatgag
cttttgaggattgagaaatcagaatatccaatgcggatagtatatgcttttggcatttct
catgagcacccaggcacactcattctaacttatatacgtagtacaaatccacaccatgaa
tatgttggtctatatccaaagggattaaaattccggaaaaggatgtttgaagacattgat
cggcttgtgacatatttccagaggcatatcgatgatcccttacatgattcggcaccgtca
atcagatcagttgccgctatggtgccaatgcgaagccctgcaaccggggcatctgtagat
agcggctggggtggttccaccaatgaaggtggttggaaaggccagtcatttgaccgagat
cgatcttctactccaggttcaagaacaggtcagaatgattacagaaatggtggtgggcga
gatgggcatccgagtgggttaccaaggccatacggtgggcgtggacgtggtcgaggtcga
ggctcgtataacagtagcagaggaaacggtgccgacaatgagaggcaggatggtggctat
gatactactactaaatgggattcagatagcaagggtgaaaatgatggatggaccaaattt
ccaggtgctaaggttcaaaactctccaggcagagaagctttcccaggtggttggggcact
ggtggtagtgggagtggtggtggcaacaatactggctggggacaagatagtggtggtggc
aacaattctggttggggacaaggtagtggtggtggaagtggtggtggtggtggtggtggt
ggtggtggtggaggaagtggaggtggtggaagcagttggggtgctactgctggtggtggc
gacaacaatgctggctggggacaaggcggtggcggtggtggtggaggaagtggaggtggt
ggtggaagcagttggggtgctactgctggtggtagcggcggcaacaatgctggctgggga
caaggtagtggtggtggaagtgaaggtggtggtggcggaagcagttggggttctactggt
ggtggtggcggcaacaatgctggctggggacaaggtagtggtggtggtgctactgctgct
gctggcggagggggcggtggcaacaatgctggctggggacaaggtagtggtggcagcaaa
aagggaaatggtggtggcagcagttggggagctgatggcggcgaaaagggaagtggtggt
ggcagcgagaagggaagtggtggtggcagcagttggggtgctgctagtgaaaagggaagt
ggtggcagcaatactggctggggacaaggtagcggtggcggcggttctgaggatgggggc
tctggctggggtaccagttctaagaaaagctctacaccatcaagacccgacaatgggtgg
tctggaggcggtggtggtggttggtga
DBGET
integrated database retrieval system
