KEGG   Tripterygium wilfordii (thunder duke vine): 120012075
Entry
120012075         CDS       T07256                                 
Name
(RefSeq) DNA repair protein RAD5B-like isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:twl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:twl03400]
    120012075
DNA repair and recombination proteins [BR:twl03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    120012075
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 zf-C3HC4_2 DEAD ResIII RING_XB3-XBAT31 Prok-RING_4 zf-RING_5 zf-RING_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 120012075
NCBI-ProteinID: XP_038719249
LinkDB
Position
13:15506881..15513428
AA seq 1249 aa
MEVMVKEEETIQLITAVLGSVPESGVCGDILQSSNNSEAKHVIDDRGIPSITKTVTGTGV
RISAFVNNEIEEPESLHGLKLEIAVKEEPDLGFESIVSVKEHVGLQSAEQLVPDTEDSMA
VDEVPPLSIVTVKEEPGLDSESKVFETREVVMEPEQLVTKTEESYGPVEVLSISIVTVKE
EPGLGSESKVSETTEVVMETEKQLATKTEESSRPEEVLPLSIVTVKEEHYLGSEMVSVKE
EIDIESLKQILPLSVVEAMPEEECLKTENKQHEKPKETEPEMTKKQPDGSNKPLLPQKSI
KDMTFEEYCMFIENRDKGQKVNAKGKGVPQLGLQRKSSTWNIRDCWLRDQSLEDGDFQLE
DDWHLVGRTIVTGICTTKGWKLVDNEIVHFAFPSAHSHYNAQWIVRFSTKRFGEIGRLPM
EWGKCLVPLVSSSKVKVLGRCIFAPSTLHMMQEIMLYVSFFIHQSIFTEGDTSTWRLDSP
SKIDSTIHPLLTLFKFLKLKPCQKAEFTPEELDSRKRSLNLEQDDTDAAAMLPIVKRRMG
CQQYPEQSKDEQAISESSLNKIVGTAEVYNLEEMEPPSTLMCELRPYQKQALYWMSESEQ
GIDVERAAKTLHPCWAAYRICDDRRASSIYVNIFSGEATTQFPTATQMARGGILADAMGL
GKTVMTIALILARPGRGSSHNQELVLRAADDAGNSKGKNGARVNTPSKANGGTLIVCPMA
LLGQWKDELETHSERETLSVFVHYGGDRTNNPMVISGYDVVLTTYGVLTASYKNDGECSI
YHMVDWYRVVLDEAHTIKSWKTQGAQAAFTLSSHCRWCLTGTPLQNNLEDLYSLLCFLHV
EPWCNWAWWNKLIQRPYENNDPRGLRLVKAILRPLMLRRTKDTVDKEGRPILVLPPIDIK
IIECEQSEAEHDFYDALFRRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMS
RADSQQYADLNKLARRFVEVNFESSTPRQGAPTQAYIEEVVEDIRRGENKECPICLEYAD
DPVLTPCAHRMCRECLLTSWRTPITGLCPICRTLLKKTELITCPTESKFRVDVERNWKES
SKVSKLLECLEKIKRSGSGEKSIIFSQWTSFFDLLEIPLQRRGIGFLRFDGKLVQKQRER
VLKEFSETNEKMVLLMSLRAGGVGLNLTVASNVFLMDPWWNPAVEEQAIMRIHRIGQKRR
VHVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRSARIEELKMLFR
NT seq 3750 nt   +upstreamnt  +downstreamnt
atggaggtcatggttaaagaagaagaaaccatccaactgatcacggctgtactcggatct
gttcccgaatcaggtgtttgcggtgacattcttcaatctagcaacaactcggaggcaaaa
cacgtcatcgacgatcgtggcattccgagcatcacgaaaacggtcaccggtaccggggtt
cggatatcagccttcgtcaacaatgaaatcgaagaaccggagtcgctccatgggctcaag
ctggagatcgcagtaaaggaagagccggatttggggttcgagagtattgtctcagtgaag
gaacatgtaggtttgcagtcggcggaacagttagtgcccgatacagaggactcaatggct
gtagatgaggttccccctttatcgattgtaacggtgaaggaagaacccggtttggattct
gaaagtaaggtgttcgagacgagagaagttgttatggagcctgaacaattggtgaccaaa
acggaggaatcttatgggcccgtggaggttctttcaatatcgattgtgacggtaaaggaa
gaacccggtttgggttctgaaagtaaggtatccgagacgacagaagttgttatggagact
gagaaacaattggcgaccaaaacggaggaatcttctaggccggaagaggttcttccatta
tcgattgtgacagtaaaggaagaacattatttggggtccgagatggtctctgttaaggaa
gaaatagatattgagtctctgaaacaaatattaccattatcggttgttgaagctatgccg
gaggaggaatgtctcaaaacggaaaacaagcaacatgagaagccaaaagaaacagagcct
gaaatgacgaagaagcagcctgatggtagcaataagccactgttacctcaaaagagtatc
aaggatatgacatttgaagagtattgtatgttcatagaaaacagagataaggggcaaaag
gtgaatgccaaagggaaaggagtacctcagttggggcttcagaggaagtcaagcacatgg
aacatacgtgattgctggttgagggatcaatccctggaggatggggatttccaactggag
gatgactggcatcttgtggggcgtactatagttaccggcatctgcaccacaaagggctgg
aaactggtagacaatgagattgtacactttgctttcccttctgctcattcgcattataat
gcgcagtggattgttcgtttctctaccaaaagattcggagagattgggagactgccaatg
gaatggggtaaatgtcttgttccgcttgtttcttcttcaaaggtgaaggttcttggtaga
tgtatatttgctccttcaacccttcatatgatgcaggaaatcatgctatatgtaagcttc
tttatacaccagtcaatattcactgaaggtgatacgtctacatggagattggattccccc
tcaaaaattgactccacgatccatcctctcctcaccctattcaaatttttaaaattaaaa
ccatgtcagaaggctgaattcactccagaagagcttgattctcggaaacgctcactgaat
cttgagcaggatgatacagatgctgcagcaatgttgcctatagttaaacgaaggatgggt
tgccagcagtatccagaacaatccaaagacgaacaagctatttcagaatcatctctgaat
aagattgttggcactgcagaagtgtacaacttggaggagatggaacccccaagtacactc
atgtgtgaactaaggccctaccagaaacaagccctctattggatgtcggaatcagagcag
gggattgatgttgaaagagcagcaaaaactcttcatccatgctgggcagcatatcgtata
tgtgacgacaggagggcttcttcaatatatgtgaatatattttcaggggaagcaactact
caatttcccactgccacacaaatggcaagaggagggattttagcggatgctatgggtctt
gggaagactgttatgacaatagctctaatacttgcaaggccaggcagaggaagctctcat
aaccaagaactcgtcttgagagcagcagatgatgcaggaaactcgaaaggaaaaaatggt
gctcgtgtgaacactccatctaaagcaaatggtggtactcttattgtttgtcccatggct
ttgttaggccaatggaaggatgagcttgaaacccattcagagagggaaactctttccgtt
tttgttcattatggtggagatagaaccaataaccccatggtgatatcaggatatgatgtg
gttttgacaacatatggtgtcttaaccgcctcttacaaaaatgatggagagtgcagcatt
tatcatatggttgattggtatagggtggtgttagatgaagctcataccattaaatcctgg
aagactcagggtgcccaggctgcctttaccttgtcctctcactgccggtggtgtctgaca
ggaaccccgcttcagaataatttggaagacctctacagccttctatgcttcttgcatgtg
gaaccttggtgcaactgggcatggtggaataaattgattcaaaggccttacgaaaataat
gatccaagaggactgaggttggttaaggctattttaaggccactgatgttaagaagaact
aaggatacagtggataaagaaggaaggcccatacttgtcctccctcccatcgatatcaag
atcattgagtgtgaacaatccgaagctgaacatgacttttatgatgccttgttcagaaga
tccaaagtccagtttgatcaatttgttgcacaagggaaggttcttcacaactatgccaat
atccttgagctactactgcgtttgaggcagtgttgcaaccacccatttcttgttatgagt
cgagcggattcacaacagtatgcagacttgaacaaactcgcaagaaggtttgtggaagtg
aattttgagtcatctactccaaggcagggagccccaacccaagcatacattgaggaggtt
gttgaggatatccgtaggggtgaaaacaaggagtgcccaatatgcctagagtatgcagat
gatcctgtactcacaccatgtgctcatagaatgtgcagagaatgtcttctcaccagttgg
aggaccccaataaccgggctatgccctatttgccgtacattgttaaagaaaaccgaactc
attacatgcccaacagaaagcaagtttcgagtagatgttgagagaaactggaaggagtct
tcaaaggtttcaaagctcttggaatgcttggaaaaaattaaacggtcaggttctggtgaa
aagagtattatttttagtcagtggacatcattttttgatctcctggaaattccattgcag
aggagagggatcggattcttaagatttgatgggaaactggtgcagaagcagagggaaagg
gttttgaaggagttcagtgaaaccaatgaaaaaatggtgttgttgatgtctttgagagct
ggtggtgtgggcttgaacttaactgtagcttcaaatgtatttttgatggatccctggtgg
aatcctgctgtagaggagcaagcaatcatgcgaatccatcgcattggacaaaagcgaaga
gtacatgttagaagattcattgtcaaggacacagtggaggagagaatgcagcaggtccag
gcaaggaagcaacgcatgattgcgggcgccttgactgatgaggaggttcgatcagccagg
attgaagagctcaaaatgttatttagataa

DBGET integrated database retrieval system