Tripterygium wilfordii (thunder duke vine): 120012273
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Entry
120012273 CDS
T07256
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120012273
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
120012273
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
120012273
NCBI-ProteinID:
XP_038719540
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Position
13:complement(12040812..12047862)
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AA seq
696 aa
AA seq
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MNMEMLEMKKEKKKGRCLAIMVVVAMELLFLFSASSAEPTTSPFRKLLLGDLKESKTKAS
PSTVSLLREYEHEDGKIIVDNGILQVTISIPDGFVTGINYNGIDNLLATQNEKNNRGYWD
VVWEEPGNHDIFDKLATTDFRVIVEDEDQVEVSFTKTWNISHHDSYTVPLHIDKRYILRR
GVSGLYAYTIMEREQGWPEVEMYQTRIVFKLRDDLFKFMALSDQRQRVMPAPEDRESGQP
LAYPEAVLLTSATNPRLRGEVDDKYQYSCEDKDNRVHGWISNADPSVGFWMITPSNEFRN
GGPIKQDLTSHVGPTVLNMFVSTHYAGEDLDTHYSSEEPWKKVFGPVLIYLNSQPNNNSS
LWEDAKKQMLTEVQNWPYDFPRSEDFPTSLQRGSITGRLLVVDRYAHYNMTWTKSAYVGL
AAPGESGSWQTESKGYQFWTKTDSKGKFLIKNVRVGNYSLYAWVPGVIGDYKFDPLISIN
PGEEIKLDVIKYHPPRAGPTLWEIGYPDRSAEEFYVPDPYPTLMNRLYTQVRAEKFRQYG
LWERYSDLYSTQDLIYTVGLDNYQKDWYFAHNSRNVGNNTYAATTWQIKFDLVHNPDQTG
NYTMQLALAAANGAEIQVRFNNGVADQPHFTTGLVGKDNAIARHGIHGLYHLYTIGVPSD
LLNNGGNTIFLTQTRTRSPFFGVMYDYIRLEGPPQP
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggaaatgttggagatgaagaaggagaagaagaaaggaaggtgtttggcaata
atggtggtggtggcgatggagctgcttttcttgttctctgcttcttctgcagagccaaca
acctccccattcagaaaactattgttaggggatcttaaagaatcaaagactaaggcttct
ccttcaacagtgtcactgcttagagaatatgaacatgaagatggaaagatcatcgtagat
aatggcatccttcaagtcacaatttcaattccagatggttttgtcactggaatcaactac
aatgggatcgataatctacttgcaacccaaaatgaaaagaacaatcgagggtattgggac
gtcgtgtgggaagagcctggaaatcatgatatatttgacaaattggcaacaacagatttc
agggtgatagtggaagacgaggatcaagtagaagtttcattcaccaaaacatggaatatc
tcccatcatgactcctacacggttcccttacacatagacaaaaggtatatattgcggaga
ggtgtatcgggtttatatgcgtacacgatcatggagcgcgaacaaggatggccagaagta
gaaatgtaccaaacgaggattgtgttcaagcttcgggatgacctgttcaaattcatggct
ctatcagaccaaagacagagggtcatgccagcgcctgaggaccgggaaagcggtcaacca
cttgcctatcctgaagcagttttgttgaccagcgcaaccaatccacggcttagaggagag
gtggacgacaagtaccagtactcgtgcgaggacaaggacaatagagttcacggatggata
tccaatgcagatccatccgttggattttggatgatcacgcccagtaatgagttccgcaat
ggtgggcccatcaagcaggacctcacctctcatgtgggcccaaccgtcctcaatatgttt
gtgagtactcactacgctggggaggacctggacacacattacagcagtgaagagccatgg
aagaaagtctttggtcctgttcttatctatctcaactcccaacccaacaacaactcttca
ctatgggaagatgctaagaaacagatgttaactgaagtccaaaactggccctacgatttc
cctcgatccgaagactttcctacttctcttcaacgtggaagcatcacaggccgattgcta
gtagtcgacagatatgctcactacaacatgacctggaccaagtccgcatacgtgggattg
gctgcaccaggagagtcaggatcctggcagacagagtctaagggttatcaattttggact
aagacagacagcaaagggaaattcttaatcaagaatgttagagtgggtaattacagtctc
tatgcttgggtccctggagttattggagattacaaatttgatccacttatttccatcaat
ccaggtgaggagatcaaattggatgtgatcaagtaccatccaccaagggcgggcccaaca
ttgtgggagatagggtatccagaccgctctgctgaagagttctacgtgcccgacccgtat
ccgacactcatgaacagattgtacacccaagtgcgtgcagagaagtttaggcaatatggg
ttgtgggaacgatactcggatttatactcaacacaggatctaatctacacggttggtctt
gataattaccaaaaagattggtattttgctcataacagcagaaatgtaggaaataacaca
tacgcagcaacgacgtggcagattaaatttgatctagtacataatccggatcaaactgga
aattacaccatgcaattggcattggcagcagccaatggtgctgaaatacaggttcggttc
aataacggagtcgcggatcagcctcattttacgacgggtttagtaggcaaggacaatgcc
attgcgagacatggaattcatgggttataccatttgtacactattggtgtaccaagtgat
ctgctgaacaatggtggcaacacaatatttctcacacagacaagaacgagaagtcctttt
tttggagttatgtatgactatattcgcttagaaggacctcctcaaccttga
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