KEGG   Tripterygium wilfordii (thunder duke vine): 120012343
Entry
120012343         CDS       T07256                                 
Name
(RefSeq) DNA repair protein RAD5B-like
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:twl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:twl03400]
    120012343
DNA repair and recombination proteins [BR:twl03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    120012343
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 zf-C3HC4_2 DEAD ResIII RING_XB3-XBAT31 zf-RING_5 Prok-RING_4
Other DBs
NCBI-GeneID: 120012343
NCBI-ProteinID: XP_038719661
LinkDB
Position
13:15384880..15391549
AA seq 1254 aa
MEVLVKEEEIIQQMTPVLGSEQTESGVCGDILQSSNNSEAKHFIEDRGIPSITKTVTGTG
VRISAFVNNEIEEPESLHGLKLEIAVKEEPDLGFESIVSVKEHVGLQSAEQFVPDTEDSM
AVDDMAVDEVPPLSIVTVKEEPGLDSESKVSETREVVMEPVKQLVTKTEESSGPEEVLSL
SIVTVKEEPGLGFESKVSEAREVVMETEKQLVTKTEESSRPEEVLPLSIVTVKEEHYLGS
EMVSVKEEIDIESLKQILPLSVVKAMPEEECLKTENKQQEKPKESEPEMMKKQPDGSNKP
LLPQKSIKDMTFEEYCLFIENRDKGQKVNAKGKGVPQLGLQRKSSTWNIRDCWLRDQSLE
DGDFQLEDDWHLVGRTIVTGISTTKGWKLVDNEIVHFAFPSAHSHYNAQWIVRFSTKRFG
EIGRLPMEWGKCLVPLVSSSKVKVLGRCIFAPSTLHMMQEIMLYVSFFIHQSIFTEGDTS
TWRLDSPSKIDSTIHPLLTLFKFLKLKPCQKAEFTPEELDSRKRSLNLEDDTDAAAMLPI
VKRRMGCQQYPEQSKDEQAISESSLNKIVGTAEVYNLEEMEPPSTLMCELRPYQKQALYW
MSESEQGIDVERAAKTLHPCWAAYRICDQRASSIYVNIFSGEATTQFPTATQMARGGILA
DAMGLGKTVMTIALILARPGRRSSHNQELVLRAADDAGNSKGKKGASVNTPSKANGGTLI
VCPMALLGQWKDELETHSERETLSVFVHYGGDRTNNPMVISGYDVVLTTYGVLTASYKND
GECSIYHMVDWYRVVLDEAHTIKSWKTQGARAAFTLSSHCRWCLTGTPLQNNLEDLYSLL
CFLHVEPWCNWAWWNKLIQRPYENNDPRGLRLVKAILRPLMLRRTKDTVDKEGRPILVLP
SIDVKIIECEQSEAEHDFYDALFRRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHP
FLVMSRADSQQYADLNKLARRFVEVNFESSTPRQGAPTQAYIEEVVEDIRRGENKECPIC
LEYADDPVLTPCAHRMCRECLLTSWRIPITGLCPICRTLLKKTELITCPTESKFRVDVEK
NWKESSKVTKLLECLEKIKRSGSGEKSIIFSQWTSFFDLLEIPLQRRGIGFLRFDGKLVQ
KQRERVLKEFSETNEKMVLLMSLRAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRI
GQKRRVHVRRFIVKDTVEERMQQVQARKQRMIAGALTDEEVRSARIEELKMLFR
NT seq 3765 nt   +upstreamnt  +downstreamnt
atggaggtcttggttaaagaagaagaaatcatccaacagatgacgcctgtactcggatct
gaacaaaccgaatcaggtgtttgcggtgatattcttcaatctagcaacaactcggaggca
aaacacttcatcgaggatcgtggcattccgagcatcacaaaaacggtcaccggtaccggg
gttcggatatcagctttcgtaaacaatgaaatcgaagaaccggagtcgctccatgggctc
aagctggagatcgcagtaaaggaagagccggatttggggttcgagagtattgtctcagtg
aaggaacatgtaggtttgcagtcggccgaacagttcgtgcctgatacagaggactcaatg
gctgttgacgatatggctgtcgatgaggttccccctttatcgattgtaacggtaaaggaa
gaacccggtttggattctgaaagtaaggtgtccgagacgagagaagttgttatggagcct
gtgaaacaattggtgaccaaaacggaggaatcttctgggcccgaagaggttctttcatta
tcgattgtgacggtaaaggaagaacccggtttgggttttgaaagtaaggtatccgaggcg
agagaagttgttatggagactgagaaacaattggtgaccaaaacggaggaatcttctagg
ccggaagaggttcttccattatcgattgtgacagtaaaggaagaacattatttggggtcc
gagatggtctctgttaaggaagaaatagatattgagtctctgaaacaaatattaccatta
tcggttgttaaagctatgccggaggaggaatgtctcaaaacggaaaacaagcaacaggag
aagccaaaagaatcagagcctgaaatgatgaagaagcagcctgatggtagcaataagcca
ctgttgcctcaaaagagtatcaaggatatgacatttgaagagtattgtctgttcatagaa
aacagagataaggggcaaaaggtgaatgccaaagggaaaggagtacctcagttggggctt
cagaggaagtcaagcacatggaacatacgcgattgctggttgagggatcaatccctggag
gatggggatttccaactggaggatgactggcatcttgtggggcgtactatagttaccggc
atctccaccacaaagggctggaaactggtagacaatgagattgtacactttgctttccct
tctgctcattcacattataatgcgcagtggattgttcgtttctctaccaaaagattcgga
gagattgggagactgccaatggaatggggtaaatgtcttgttccgcttgtttcttcttca
aaggtgaaggttcttggtagatgtatatttgctccttcaacccttcatatgatgcaggaa
atcatgctatatgtgagcttctttatacaccaatcaatattcactgaaggtgatacgtct
acctggagattggattccccctcaaaaattgactccacgatccatcctctcctcacccta
ttcaaatttttaaaattaaagccatgtcagaaggctgaattcactccagaagagcttgat
tctcggaaacgctcactgaatcttgaggatgatacagatgctgcagcaatgttgcctata
gttaaacgaaggatgggttgccagcagtatccagaacaatccaaagacgaacaagctatt
tcagaatcatctctgaataagattgttggcactgcagaagtgtacaacttggaggagatg
gaacccccaagtacactcatgtgtgaactaaggccttaccagaaacaagccctctattgg
atgtcagaatcagagcaggggattgatgttgaaagagcagcaaaaactcttcatccatgc
tgggcagcatatcgtatatgtgatcaaagggcttcttcaatatatgtgaatatattttca
ggggaagcaactactcaatttcccactgccacacaaatggcaagaggagggattttagcg
gatgctatgggtcttgggaagactgttatgacaatagctctaatacttgcaaggccaggc
agacgaagctctcataaccaagaacttgtcttgagagcagcagatgatgcaggaaactcg
aaaggaaaaaagggtgctagtgtgaacactccatctaaagcaaatggtggtactcttatt
gtttgtcccatggctttgttaggccaatggaaggatgagcttgaaacccattcagagagg
gaaactctttccgtttttgttcattatggtggagatagaaccaataaccccatggtgata
tcaggatatgatgtggttttgacaacatatggtgtcttaactgcctcttataaaaatgat
ggagagtgcagcatttatcatatggttgattggtatagggtggtgttagatgaagctcat
accattaaatcctggaagactcaaggtgcccgggctgcctttaccttgtcctctcactgc
cggtggtgtctgacaggcaccccgcttcagaataatttggaagacctgtacagccttcta
tgcttcttgcatgtggaaccgtggtgcaactgggcatggtggaataaattgattcaaagg
ccttacgaaaataatgatccaagaggactgaggttggttaaggctattttaaggccactg
atgttaagaagaactaaggatacagtggataaagaaggaaggcccatacttgtcctccct
tccatcgatgtcaagatcattgagtgtgaacaatccgaagctgaacatgacttttatgat
gccttgttcagaagatccaaagtccagtttgatcaatttgttgcacaagggaaggttctt
cacaactatgccaatatccttgagctactactgcgtttgaggcagtgttgcaaccaccca
tttcttgttatgagtcgagcggattcacaacagtatgcagacttgaacaaactcgcaaga
aggtttgtggaagtgaattttgagtcatctactccaaggcagggagccccaacccaagca
tacattgaggaggttgttgaggatatccggaggggtgaaaacaaggagtgcccaatatgc
ctagagtatgcagatgatcctgtactcacaccatgtgctcatagaatgtgcagagaatgt
cttctcaccagttggaggatcccaataaccgggctgtgccctatttgccgtacattgtta
aagaaaaccgaactcattacatgcccaacagaaagcaagtttcgagtagatgttgagaaa
aactggaaggagtcttcaaaggttacaaagctcttggaatgcttggaaaaaattaaacgg
tcaggttctggtgaaaagagtattatttttagtcagtggacatcatttttcgatctcctg
gaaattccattgcagaggagagggatcggattcttaagatttgatgggaaactggtgcag
aagcagagggaaagggttttgaaggagttcagtgaaaccaatgaaaaaatggtgttgttg
atgtctttgagagctggtggtgtgggcttgaacttaactgcagcttcaaatgtttttttg
atggatccctggtggaatcctgctgtagaggagcaagcaatcatgcgaatccatcgcatt
ggacaaaagcgaagagtacatgttagaagattcattgtcaaggacacagtggaggagaga
atgcagcaggtccaggcaaggaagcaacgcatgattgcaggcgccctgactgatgaggag
gttcgatcagccaggattgaagagctcaaaatgttatttagataa

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