Tripterygium wilfordii (thunder duke vine): 120012680
Help
Entry
120012680 CDS
T07256
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Module
twl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120012680
Enzymes [BR:
twl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
120012680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
120012680
NCBI-ProteinID:
XP_038720043
LinkDB
All DBs
Position
13:16549946..16551623
Genome browser
AA seq
479 aa
AA seq
DB search
MAITWRAPASAFLLLSLVLATCEARPRGAPGTVVGQATRTVADIARHDARNSKRDPNEKI
FNVLDFGATPDGKKMSTMIIVIRTLLPKVDCSKKKKTVLVLQAFQKAFSAACQWKGKTRV
LVPRGVFLVGALILQGPCQGPPPFIVQVSGTVKAVTDISEYADGVWVLFDGINGLVLTGG
GTFDGQGAQSWQYADCKTNPDCQPLPVSIKFNHISNAIIRGITSLNSMGFHLGIVLSENI
RAYNIHLIAPADSPNTDGIHISQSRLIKVARSVIATGDDCLSVIRDSSDVSVKKVTCGPG
HGISIGSLGKYPDEHLTSKVIVKNCTLLNTDNGVRIKTKAGSVRGQASGIIFQDIIMKDV
RNPIIIDQNYESSKGKVSFFSFSDYLKLRQTPLYLTFEFCVVQSSLVKISDVHFINIRGT
TSSNVGVNLLCSNQNPCQNVQLANIDLHYTGPQRGLPLSSSCANARINYAGVQNPPPCR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccattacatggagagctcctgcaagtgcctttctcctcttgagtttagttctggca
acatgtgaagctaggcctcgtggtgcacctggtacagtggttggacaggctacccgtaca
gtggctgatattgctcgccacgatgctaggaattccaagagagaccctaatgaaaaaatc
ttcaacgtcttagattttggtgctacacctgatgggaaaaaaatgagcacaatgatcatt
gtcatccgaaccttactcccaaaagttgattgttcaaaaaaaaaaaaaactgttcttgtt
ttgcaggcattccagaaggcattcagtgctgcatgccaatggaagggaaagacacgagta
cttgttcctcggggagttttcttagtaggggccctcatccttcaagggccatgccagggt
ccacctcctttcatcgttcaagtctcaggaaccgtgaaagcagtgactgatataagcgaa
tatgctgatggtgtttgggtcctatttgacggaatcaatggcttagtacttactggtgga
ggcacctttgatggccaaggtgctcaaagttggcaatatgcggattgcaaaacaaatcct
gactgccaaccactcccagtctcaataaaattcaatcacatatcaaatgcaatcattaga
ggaatcacttcacttaatagtatgggattccaccttggaattgttctcagcgaaaatatc
agggcatacaacattcacctaattgcacctgctgatagccccaacactgatggaatccat
atcagccaatccagactgatcaaagtcgccagaagtgtcattgctacaggtgatgattgc
ctctctgtcattcgtgacagctccgacgttagcgtcaagaaagtgacctgcggccccgga
catggcatcagtattggtagtctaggcaagtacccagatgagcacctcacatctaaagtg
attgtgaagaactgcacattattaaacacagataatggagtaagaatcaaaacaaaggca
ggatcagtcaggggtcaagcttcggggatcatattccaggacattatcatgaaagatgtt
agaaaccccatcatcatagatcagaactacgaatccagcaagggaaaggttagcttcttt
tctttttctgactacttaaaattgagacaaactccattgtacctaacttttgagttctgt
gttgtgcagtcatcacttgtaaagatcagcgacgtccatttcatcaacattagaggaacc
acatcctcaaatgtcggtgtcaatcttctgtgcagcaaccaaaatccttgccagaatgtt
caacttgccaacattgatttgcactacactggtccacagagaggattgcccctgtcttca
tcatgtgctaatgcaagaataaactatgccggtgtccaaaaccctccaccttgtcgatag
DBGET
integrated database retrieval system
