Tripterygium wilfordii (thunder duke vine): 120012690
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Entry
120012690 CDS
T07256
Name
(RefSeq) F-box/LRR-repeat protein 20-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
120012690
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120012690
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
LRR_RPS2
LRR_14
LRR_At1g61320_AtMIF1
LRR_8
F-box
LRR_R13L1-DRL21
F-box_5
F-box-like
Herpes_U47
Motif
Other DBs
NCBI-GeneID:
120012690
NCBI-ProteinID:
XP_038720054
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Position
13:11189358..11192502
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AA seq
412 aa
AA seq
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MDNTNSSNSISVSINETLTDDELRSILSKLDKKDGEVFSLVCKRWLHLQSSEQKKLALRA
GPHMLHRMAARFSRVVELDYSNSMARSFYPGVTDSDLAVVAQSFTCLRVLKLQDCKAITD
TGMASIGSGLSSLQSLDVSNCRKLTDKGFSAVAKGCHDLRGLHLTGCRLVTDGLLLALSK
NCPNLEELGLQGCTNVTDDGITTLVSGCQQIKFLDINKCSNVGDVGISSISKACSSFLRT
LKLLDCYKVGDESILSLARFCINLETLIIGGCRDVSDKSIKSLAAACKNLKNLRMDWCLN
ISDSCLSCILTHCNKLEALDIGCCEEVTDAAFQDLGNCETKLSLKVLKVSNCPKITITGI
SLLLGKCNSLAYLDVRSCPHMTKARFDEAGLQFPDCCKVNFTGSLCEPDVLV
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggataatacgaattcctcgaattcaatttcagtctcgataaacgagacgttaacggac
gatgagcttcgatcgattctttcgaagctagataagaaggacggggaggtgttctcgctg
gtctgcaagagatggctccatctgcagagctccgagcagaagaagctcgccctccgtgct
gggccccacatgctccacagaatggcggccagattttcgcgggttgtcgaattggactat
tccaattccatggcaaggtccttttatcccggtgttaccgactctgatcttgctgttgtt
gcccaaagcttcacgtgcttgagagtcctcaagttgcaggattgtaaagctataactgac
actggaatggcatcaattgggagtggcctttcttctttgcagtcgttggatgtatccaat
tgtagaaagctgactgacaagggattttcagctgttgccaaaggctgtcatgacctgcga
ggcctgcatcttactggttgcagacttgttactgatggattgttattagctctttctaag
aactgtcctaacctagaagagttgggcctgcaggggtgcactaatgtgacggacgatggt
atcaccaccctggtaagtgggtgtcaacagatcaagtttctagacatcaataaatgcagc
aatgtcggagatgttgggatttctagtatttccaaggcatgttcatcttttctcagaaca
ttgaagctgttggactgttacaaagttggtgatgaatctatattatccttagctagattc
tgtataaatcttgaaacacttataattggtggctgccgggacgtctctgataagtctatc
aaatctctagctgctgcttgtaaaaatttgaagaacttgcggatggattggtgtttaaat
atttccgactcttgcttgagctgcatactcactcactgcaacaagctggaggctcttgac
attggatgttgtgaagaagtaacagatgctgctttccaggatttaggcaattgtgaaacc
aaattgagtttaaaggttttgaaggtcagtaactgcccaaagattacaattacaggtatc
agtttactattggggaaatgcaattctctggcgtaccttgatgtgaggtcctgtccacat
atgacgaaggcacgctttgatgaggctggattacagtttcctgattgttgcaaagtgaat
ttcactggaagtttatgtgagccagatgttcttgtttga
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